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Simple sequence repeat (SSR)
>UN44312
GGATTCTGCTTCACTTCATTACAAACAAAACAAACAAACCATAAACTTCGCCTTCTTTTTGTTGAGTAACAAAAACAAAGTACTTTTTGTTTCA
CAGAGGCAAGAAAACCCAAATAAACAGAGCAACACACAAAACAGAGTTTTGAGATTATGGGGAAGCACTTGTTCAGGTCATCTCCTCCACCGGA
GAAACAAACAGCTCACCAAACACTCGCGGAAACAGCTGTACAGGAGTGTATGAGCAACATCAACACCGTCATATCCAAATGGACTTCTCCTTCT
TCTTCTTCTTCCGACCAATTCCTCTTCTCCACCAACAGTCGTCGCGAAGCAGAGGAGTTCGTCGAAGCCGTCAGGCATCTGCACATCACGATGC
ACCGTCTTGCCGCCGTCAACCCCTCTTCCGACAAGCTAATCTACTTTCAGAACCTGATGCAATCAGCGATGAACCTTCTCGAATCGGAATTCAA
CCGAGTCTTGATGGAGAACCGACAAAAGGGTCCGGATCCGGAACCGGTTCGTCGGCTACCGGTAAATCTCATGGAGGACGTAGCCATTGAATGA
GAATCTCGTGATATATTAATTAAGTTTCTTTTGTTTTGTTTTAGGTGGTGTGGTTAGGGTGCATACAGTGATTATGTATGATCGTATCATATAA
TAATATGTTAATTATCC |
Primers for UN44312 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATGGGGAAGCACTTGTTCAG |
60.111 |
20 |
TGGTGGAGAAGAGGAATTGG |
60.042 |
20 |
166 |
151 |
316 |
2 |
TTCAGGTCATCTCCTCCACC |
60.048 |
20 |
TTCGACGAACTCCTCTGCTT |
60.134 |
20 |
183 |
166 |
348 |
3 |
ATGGGGAAGCACTTGTTCAG |
60.111 |
20 |
TTCGACGAACTCCTCTGCTT |
60.134 |
20 |
198 |
151 |
348 |
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