Simple sequence repeat (SSR)
>UN44404
AAAAGAAATTCTACGCAACCGAATCGGACATCGACAGAGAGAAAGCGAAAACTCGGAGATCGAAATAGATGGATTCGCTGAAAGGAAAAGGGAA
AGGATCGAAGGGAGCTTCCTCCTCTTCCAAGATGGATCTCCTCAAGGAATGGACCAATTGGTCTCTGAAGAAGGCCAAAGTCGCGACTCAATAC
GGATTCATCCCTCTCATCATCGTCATCGGCATGAACTCCGATCCCAAGCCACATCTCTTCCAACTCCTTAGCCCTGTCTGATCCTACTATTTCA
TCATCATCATCATCCTCAACCAGATCAAATCAATCGTTTCCGATGTTTCTCTGGTTTGGCTTCATATCTTTACGCGTGCGTCGTCTTTGATTCG
CCGGATCTTTTTTATGTTTTTCATTAGCTATGTTCTAGAATGCTTTATCTATGCTTCTTATACTCTCTGTGTGGAATCAGTTAAGATTATGATA
ATGTGATATCGAATTCACGCTTTGAATCTGTGTTCGCTAGGATTTTCTTATTCAAAGTTTAACGTTTGACTTTTCTTCTTTGAGAATTGAAATT
ATTAGCTGTGTTATTCC |
Primers for UN44404 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGATCTCCTCAAGGAATGG |
60.003 |
20 |
CGCACGCGTAAAGATATGAA |
59.864 |
20 |
236 |
127 |
362 |
| 2 |
CTCCTCAAGGAATGGACCAA |
60.042 |
20 |
CGCACGCGTAAAGATATGAA |
59.864 |
20 |
231 |
132 |
362 |
| 3 |
GAAAGGATCGAAGGGAGCTT |
59.789 |
20 |
CGCACGCGTAAAGATATGAA |
59.864 |
20 |
271 |
92 |
362 |
|
|
