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Simple sequence repeat (SSR)
>UN44447
CTTCATCTATTCGATTCTCAATCAATCTCCACTTCTTCTCTAACTGAATCAGATTCGTATTTTCAGTTAGGAATCGACCCGGATTCTTGGGCTT
GTCAGTTAAAAACTCTGTTTGCGTTTTTAGCAGATCGAATCAAAGACCAGCGAGTGAATGAGAGCAAATTTCGCTAAAAGTTAAAAGCGGATTC
TATATATATATATATCAGTAAAAAGGATATGACTTTCTCAAGATTCTTTCATGTGGTCGAAGAAGGAGGTGGAGGAGAAAGAGAAAGGCTGTTA
GCTGCTTCAGAGACACAGGAGCTGTTTGTCGTAGAAAACATGACTGCCACTGAAGCTAATAATAACCGCAAAGGGGACGATATTGGTATCGAAA
TACCTGACACTGCTCACCAAATTAGCAGCGGTATTGTAAATTCGATTTAACACTCTCTCTTTTTTTTTTTTTTTTTTTTAAATTGTTATTTAGA
TTTTCCTGAATCCAATTGTTGTTTTTTTTTAATTAATAACGGTTTTTTATCTGGGGATTGACGCCCAATTTTTAATACATTTCTTCTGTAATTT
TGAGTTGACATATTCAAATACAATCGTTTTAGGAGTT |
Primers for UN44447 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGCGAGTGAATGAGAGCAA |
60.287 |
20 |
ACCGCTGCTAATTTGGTGAG |
60.27 |
20 |
267 |
142 |
408 |
| 2 |
CAGCGAGTGAATGAGAGCAA |
60.287 |
20 |
TCGATACCAATATCGTCCCC |
59.605 |
20 |
233 |
142 |
374 |
| 3 |
TTCAGTTAGGAATCGACCCG |
60.066 |
20 |
TCCTGTGTCTCTGAAGCAGC |
59.288 |
20 |
241 |
62 |
302 |
|
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