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Simple sequence repeat (SSR)
>UN44511
GCTTCAGTTTACAAACTCTATCTCTCTAGATCTGTTCTTGTTTTCAAAGACTACATCAATCTTTCTCTCTATCAAACTTTCACAATGATGAGCC
CAGAGCTAAGGAGAAATGCATTACCCGATGATCAAGTAGAGTAACGACTGATCGATCTTCTTCTTCTTCTAGCTCGTCTGCGTTTTCTTTCTCC
GGCTCCGACGAAACTAACCGTCGACGGAAATAACAAAAGAAAAAAAAATCTGGTAGAGAGAAGAATTAGTGGAGACTTTGACTAACTTTTTATT
TCTCAATATATACTCAACAGTCAGCACCGTTTGTTTATTATGGGTCCCACAATGCTAACCATAAGGTTCGTATGATTGCTTTTGCGTAAAAAAG
TAATTGCAATTAAAAATACATATTTGTAATGATTTTTTAATTGGTAAATCAAAGAACGTATTCTTCAAGTTTGTAAAAAAAGTAGATTATATGA
GTGGAAATCCTCTTAATTTAATTTAGTGGTTTTACCAAGGTTTATTGATACGTTTAACACCAAAAACCTAAATTTTAAAAATTTCAAAGAAAAT
ATTTTTTAAAGATTAGTTAAAAAAACTTACCGAAGATCTTCGTTATGGTGAAAATAGAAATAAAGTTCAATGTGGTATCGATATATAGTGAAAT
TGTCAATTGTAAAACAGCATATATTATGATTTTCATAATTTGTAATTAACATATAAGTAACTATTGGATTTTTTAAC |
Primers for UN44511 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCACAATGATGAGCCCAGA |
60.201 |
20 |
CGGAGAAAGAAAACGCAGAC |
59.993 |
20 |
111 |
79 |
189 |
| 2 |
TTCACAATGATGAGCCCAGA |
60.201 |
20 |
GGAGAAAGAAAACGCAGACG |
59.993 |
20 |
110 |
79 |
188 |
| 3 |
TCACAATGATGAGCCCAGAG |
59.787 |
20 |
GGAGAAAGAAAACGCAGACG |
59.993 |
20 |
109 |
80 |
188 |
|
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