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Simple sequence repeat (SSR)
>UN44528
GGAGGAAGCAACCGTTCCAACCAACGTCGAAGAGACGGTGACTGCACCGGTTGCGAGTGAGAAGAAAGCGAAGAAGACGAAGGAAGCTAAAGCT
CCGAAGAAGAAGCCTGCAGCGAAAGCTCCAAGGAAGAGATCTTCTTCTTCTCACCCAACCTACGAAGAGATGATTAAAGACGCGATCACGACGT
TGAAGGAGAGAACCGGATCTAGCCAATACGCGATTCGGAAGTTCATAGAGGAGAAGCAGAAGACGCTTCCTCCAACGTTCAGGAAGCTTCTCCT
CGTCAATCTCAAGAGACTCGTCGCTTCAGGGAAGCTCGTCAAAGTCAAAGGCTCCTTCAAGCTCCCCTCCGCTACTAAATCAACCGCCGTTGCT
GCTCCTGCTGCTCCTAAACCTAAACCGAAGACGAAGACAGTGGCTGCTGTGTCCAAGACTAGAACTTCTCCAGGGAAGAAGAAGGCTGCTCCTC
CTGCTAAGAAAGCCGCCGCGGCTGTAACTAAGAAGGCAAAGGCCAAGGCTCCGGCTAAGAGCGTGAAGGCGAAGGCTGTAAAGTTTCCGGCGAA
GAGGGTTTCAACAAGGAAGGTGAAGAAGTGAAAGAAGATTGGGGGTTTAGGGGGTAGTGAATTGGGGGAGATTGAATGAATGAATGAATGAATA
CATGTGTTGTAATGGTGGTTAGAGAGCTTCTCTTAGGGGTAGTCTTTGTATAATTTGAATCATATCCTTTGAAGAAGCTTTTTGCTTTTTATCT
TTGTTTCTGGTTTTTTCTTGAAACCACCCTTTTGTTCCTTGTTGTAATTTTTGTGTTTGTTTTGAAATTAAAGCTTCTTACATGGTG |
Primers for UN44528 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGTAAAGTTTCCGGCGAAG |
59.876 |
20 |
GGAACAAAAGGGTGGTTTCA |
59.807 |
20 |
245 |
546 |
790 |
2 |
GCGAAGAGGGTTTCAACAAG |
59.853 |
20 |
GGAACAAAAGGGTGGTTTCA |
59.807 |
20 |
231 |
560 |
790 |
3 |
CTAAGAGCGTGAAGGCGAAG |
60.284 |
20 |
GGAACAAAAGGGTGGTTTCA |
59.807 |
20 |
266 |
525 |
790 |
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