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Simple sequence repeat (SSR)
>UN44546
AAACCCTAAAACTTTATAAAGCCCTTTACTCTTTTCCGTATAAATTGAAACAACCAATTATGTTACTGAATTAAAGTGAGACTTCAGTACAGAT
ACAATGCATGCTGAAAGATTCTCTGTGAAGAACATAAAAGCATAAGAGTAATTCAAATATGAAACGGCCCTTTTTAAGGCGTAATCACTTGAAA
TTTGAAAGCCAGAATCTGCTAGTTGATCATCAGTTGCGAATGTCAGGAACAGGCAAGTTCTTCAACTGCAACTGTTTGTGCATCCATTGCCAGT
TCTCTGGGGTTACTTCTCCTCCGAGAGAACGGATGACCGATCCCCACTGCATGATCCCATTTTGCAACACTCTTCCAAAGGCAATCCCTTTATC
AATCCATACAGAAACCCGTTGGCGAATAGGTCACCTGCTCCCGTGGCATCAGTAGATATTGTCTCACCGATGGCCGGTACTTGAACCACCTCCT
TATCATGTTTTGCGATGCAGCCTTTAGGGCCTAAAGTTACCACAGCCCAACTGCAATGCCTGCTTAGGAACTCAAGAGCAGCCTCCGGGCCCGC
TTCTTGCTCACCCCTTAGCAGTTCAGCTGCTTCATCCTCGTTAGCAAAGCAAAGATCTATGTTACCAGACTCCAGAAGCTGTCTCAGCTCTGAT
CTATAATTCCGGACCATCTCAAAACTAGCTAAATCCAAAGAAACAGAAAGACCTTCTTGCTTGGCAAATCCAATAGCTGCTTTAATTACTTCTA
AGTTAAGAACTGCATATCTTAGAGCCAGTGAAATCTTCTCTGCTTAATTCATCAGCCTGAATCTTGACAGCACTGGAGAGACATGGACGCATTG
TGCGATTACCAGAGTCATCAACCAAGCAAACGCACTGCCCAGTGGAACCTTTCTTCTGCCTCAACCTTGAGATACTGACACCACTGAAACCCAT
ATTGCTCACAAACAACCGCCCTTGCTCATCGTCGCCATAAGCCCCGATGATCCCCGTGGGTATACCGAACCCAACACTCAATCCTCGAACAGTA
TTAGCCACACTTCCACCAGCCATCTTCTTTAACGGAGCCGCACTGATATGTGCGTTAAGCTCTTCAAGTATATGCTCTAACTCATCCTTTTGCA
CGGGAATGGAGCCACCACGATCACCGGGAATTTGATCGAGTAAGGACCAATCGACGGGAGCGACGTTATCGATAAGAGCTGCTGGTTGGAGTCC
AAGTACCACTGGAGGATGAGCTTCCTGGCTATTATTGGGCAAGGCCTCCGCTACCATTCTCTGACTGAGATCTCTCTCTCTCTCTCTCTCTCTC
TCTCTGTATCTGCACTCGATAAGGCCTTGCCCGATC |
Primers for UN44546 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGAGCTGCTGGTTGGAGTC |
59.604 |
20 |
AAGGCCTTATCGAGTGCAGA |
59.978 |
20 |
143 |
1202 |
1344 |
2 |
GAGTAAGGACCAATCGACGG |
59.55 |
20 |
AAGGCCTTATCGAGTGCAGA |
59.978 |
20 |
179 |
1166 |
1344 |
3 |
GAGGATGAGCTTCCTGGCTA |
59.532 |
20 |
AAGGCCTTATCGAGTGCAGA |
59.978 |
20 |
111 |
1234 |
1344 |
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