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Simple sequence repeat (SSR)
>UN44569
CGAAACTAAAATTTTTACATCTAAACTTTTTGGCCGTTACAATTAGCTTGTATAATCTTTTTCTTTAAACCAAAAAAATAAGATAGCCACCACT
TACCACAGAGAGGCATCTTTAATAGAAGGAAACGAGAGAAGTTCTCTGTATTCAGAGAGAGAGAGAGAGAGAGAGAGAGATGGGTGTTGTAGAG
GAAGCTCACAACGTGAAAGTGATCGGCACAGGAACTCAAGCAACGATCGTCTTAGGTCATGGGTTCGGCACGGACCAGTCAGTGTGGAAACACC
TGGTCCCACATCTGCTCGAAGATTACCGCATCGTTCTCTACGACAACATGGGAGCCGGTACGACTAACCCAGACTACTTTGACTTCGATCGTTA
CTCAACTCTAGAAGGTTTCTCCTTTGATTTGATCGCAATCTTGGAAGATCTTCAAATCGAGTCTTGTATCTTTGTTGGTCACTCTGTTTCCGCC
ATGGTTGGTCTCTTGGCTTCTCTTAACCGACCTGATCTCTTCTCCAAAATCGTCATGATCTCTGCTTCCCCAAGGTATGATTATTACAGATTCG
TCATCTAATGTGTTCAAGTTCTTTTGATTCTACGTCTCCGACCAAAGTACATATATGTTCCTTCTCTTGTCTC |
Primers for UN44569 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCACTTACCACAGAGAGGCA |
58.879 |
20 |
TTGTCGTAGAGAACGATGCG |
60.011 |
20 |
239 |
90 |
328 |
2 |
TTGGCCGTTACAATTAGCTTG |
60.136 |
21 |
TCGTTGCTTGAGTTCCTGTG |
60.025 |
20 |
205 |
30 |
234 |
3 |
TGGCCGTTACAATTAGCTTG |
58.841 |
20 |
TCGTTGCTTGAGTTCCTGTG |
60.025 |
20 |
204 |
31 |
234 |
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