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Simple sequence repeat (SSR)
>UN44631
GCAGACAAAAGTAACACTTTAAAACTATAAACATGCACTACACGAACGGTATACACTAATAGTTCAGGTAATAATTAGGTTTAGATAGATCCAT
AAACATAGGTAGACAATAACATAAACGCGAGAGACACTCATGATGATAATAACAATCTAGAATTAAGCAGCTTCCTTCACAGGAGCTGGATCTT
GGATCTTGACGTAACCCAACTTCTTCAAGCTAGCCGCATCCGACTCCTCGTTCTCGTAATCATCCTCCTCCTCGAAATCGGATCCGCCGCGACG
GTCCACGACGAAAGCCCAGGCGAGGTACATGGTAGCCGCGGTGAGGGCACCGCAACCGGCGCCGAATAAAAGAGCCGCCACGACGCTGAGGATG
TCTCTGGTGCGGTCCTTGACGTTCTCGGAGAAGGGTATCTGAGGATGATCCTCTCGGATCCGAGGCTTCTCGGCGGCGGCGGCGGAGGAAGGGA
GGGATCCGTGGCGGCGATCGACGAAGAGAGGGACGGGGTAGAGACGGCGGATTGTGAAGACGGTGACGAATCGGGTTGAGGATGATTCGAGGTT
GGGGTTTTCTGGGGTTATTGAGAGGGAATAGGAGGAGATGAGGAAGGTTTTGCAAGGACGAGCGGCGATGGAGGAGATTGAAAGGGAAGAGATT
ATGATCGCGAGGAGGAGGAGGTAAGAGGAGGAGGAGGATGACGCCATTGTTGTGTGTATAGTCTTTGACTTTTTCTTCTTTCTTCCC |
Primers for UN44631 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGACGCTGAGGATGTCTCT |
60.017 |
20 |
GTCTCTACCCCGTCCCTCTC |
60.073 |
20 |
154 |
362 |
515 |
2 |
ACGACGCTGAGGATGTCTCT |
60.017 |
20 |
CTCGTCCTTGCAAAACCTTC |
59.853 |
20 |
265 |
362 |
626 |
3 |
ACGCTGAGGATGTCTCTGGT |
59.866 |
20 |
GTCTCTACCCCGTCCCTCTC |
60.073 |
20 |
151 |
365 |
515 |
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