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Simple sequence repeat (SSR)
>UN44636
GTCAGGCCCGGTTAAAGCATTTATCAATCCAAAAGAATGTCTTTCCAGTTTATTTATTTTGATCATCCAGAGAAAACGTTTAAAAACGAAAGAG
TTGGGGTTTCAACAATCAATCCATCCACACGACCTTCTTCTGGCCTTAAAGCATAAAATGATAAAAGAGAGCCTGATCTTGCTCAAATCAGAGA
GGACCAGGGAAAGTTCCGGTCTCCCTCTGCTCATTCCACTTGTCAACCTGCGGAGAGAGATTAGCGCATTGTTAAGAATGTGGATAGAGAAAGA
TGATAATCAAGTAGCAGAGAAAAGTAACAAAAAAAACGCGTGTTGACAAAATAATTTGGCAAAAAAAAAAACCACCCATCCCCATAATACAATT
CCAATGCAACCAAATCACAATCGAATTCCACACGACGAATCTCATGCTAAGCATTAAATAGTGTGATCAATCAGATCTTGAATCAAGGTCGAAA
CTTCATAACCAAAATTCAGATATAATCTCCGGCGGAAAATAGAGCTAAAGCGTATGTAAGATAAAATAATAAGAACGATTACCTCATCCTCCAT
GGCTGATATGATCTGATCTGATCTGATCTGATCAGAAGACGAACGGTGAGAAGATTGTGTTTGTGTAGGAGAAAAGAGGA |
Primers for UN44636 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAACCACCCATCCCCATAAT |
60.131 |
20 |
CACAATCTTCTCACCGTTCG |
59.288 |
20 |
273 |
351 |
623 |
| 2 |
CACACGACGAATCTCATGCT |
59.862 |
20 |
CACAATCTTCTCACCGTTCG |
59.288 |
20 |
219 |
405 |
623 |
| 3 |
CCACCCATCCCCATAATACA |
60.266 |
20 |
CACAATCTTCTCACCGTTCG |
59.288 |
20 |
270 |
354 |
623 |
|
|
