 |
Simple sequence repeat (SSR)
>UN44642
CTTTAAACGAATCATATCTTTATATATCTTGGAAAAAAAATCAGTAACACCAAAAATCTTGACTTTACAAATCGAATAACAAATTACAAATATA
AACCAAAACGTATATGAAATCCCACAAAAATAATACCAAATAAAATATCTTTCACTCATCCCTGCTGCATCAACAACGTTTTAAAACTTGTTTT
CTTCTTCCCTTCTTCTAAGGTGTCTTGTTTTGGCACCCACCAAACCCTAATGCTCTTGTCAAGACCTCCGCTGTAAAGCATGAATCCAGCACCC
ACATTGTTGGGTGAAGCTTGCAAGCATTTCACCGGACCTTCATGCCCATGTATGACTCCAAATTTACAGAGCTTACCACTCTCTTCTCTCTTCC
ACAGTCCGATGCTCTCAAGACAGAGAGAGGGAGACAGACACTGAGTGAGCTTGGGAGAGCTTGAGACCTCAAGAACTGAAGACTCGAGAGAGTG
AGCTAAGCAGTGTGAGCTTGAGACAAGAGAGCCAAAACACAGAAGAGAGAGAGGGAGAGCTCGAGCTGCGGCAAAGAAGAGAGAGAGCTCTGAA
GACGAGAGAGTGACAGAGAGAGCTGAGTTCGAGAGAGACAGAGAGAGCTTCAAGAGATCGAGAGATCGAGAGAACGAGAGAGACAGAGAAAGCT
GAGTTCGAGAGAGAGAGAGAGAGCTGGGTTCGAGAGAGAGAGAAAGAGAGAGAGAGCTGGGTTCGAGAGAGAGAAAGAGAGAGAGATCGAGAGA
GATGTGTCTGAGATCGAGAGAGATGGAGAAGATAAGGCAACTGCGTCAATGGAAAAGAGAGTTGCGTCTACGG |
Primers for UN44642 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCGGCAAAGAAGAGAGAGAG |
59.454 |
20 |
CTTTTCCATTGACGCAGTTG |
59.317 |
20 |
272 |
538 |
809 |
| 2 |
CGGCAAAGAAGAGAGAGAGC |
59.454 |
20 |
CTTTTCCATTGACGCAGTTG |
59.317 |
20 |
271 |
539 |
809 |
| 3 |
CTGCGGCAAAGAAGAGAGAG |
60.41 |
20 |
CATTGACGCAGTTGCCTTAT |
58.799 |
20 |
268 |
536 |
803 |
|
|
