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Simple sequence repeat (SSR)
>UN44675
CCTATCTCTGTCGTAATAATCTTATTTCTTCTATCCGTCCCCCTGTCTGTGATTAGTTGTTTTTGACTGGGTGAAGGAGGTTTTGTATGGTGGT
GGCGGTAATCTTACAAAGAGAAATCTTGAACATAAATAATGATATACTAAACCCAAGCTTTCAAGTCAGATTCTGTTCAGTTGGTTCGGTTATG
TATTTCCACGAATATATAAAACTTCCTTCACCCAGTCATGTTATTATGAACATTATATATCTTATAGTCGTCTAAAGAGTAGAGTGGAGAGAGC
AAGAGTAAATTCTGAAAAAGAGACAAAGAAAAAGAACAAAAGACTGATGAAAGTTGGTGTTTTTGATGTTCAGCAAACATCTTTGTTGCTTCAG
ATAGTGTGTCGCGCTTGTTACTTGTGCTTTGATGAAGGAAAGAAGAAGTCTTTGACAGAATCTTGAGCCGATACTATTCTCTGTTTGATAGGAT
CAAGAGCGTTAGGCTCGGGGCCGTAATCAGCGGTGAGGAGTAAGTAAGACGCAACAGCAGTGGCCACAATAGTCGTTCTTCTCACCACCTTGTC
CACTTGGGGATTCATCTCGTTTCCAACCAACTAGAAGAAGAAGAAGAAGAGAAAATGTGATGAATGTCTCCAGCC |
Primers for UN44675 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCAGATAGTGTGTCGCGCTT |
59.621 |
20 |
GGCTGGAGACATTCATCACA |
59.637 |
20 |
267 |
373 |
639 |
| 2 |
TTCAGATAGTGTGTCGCGCT |
59.621 |
20 |
GGCTGGAGACATTCATCACA |
59.637 |
20 |
268 |
372 |
639 |
| 3 |
TTGACAGAATCTTGAGCCGA |
59.522 |
20 |
GGCTGGAGACATTCATCACA |
59.637 |
20 |
212 |
428 |
639 |
|
|
