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Simple sequence repeat (SSR)
>UN44754
CAAAATCATGTGTTGTTTTGTCTTCATCCGCCTAATCAGTAATCCCAAAGAACAAGTACAAAAGTCTACAAGAGCGGAGAGAGAGAGAGAGAGA
GAGAGAGATAATTTACAAAAAAGGAACTGGAAAAAAAGCAACTGAAGTGAACTGCATGGCTGTTTCAGAGGACCTGCTTGAGCCAGTGGCAGTC
CACAGCATCTTTCTCTAACTCGTCTTTCAACTCGCATAGGCGTTTAAGTGAATCTTTAAGCTCCATTTTATCAACTGGTATCTCTGCAAATTCT
TTCAGAAACTTGTGAGCTCGTGATGTCCCTCTTGATACTTCCTCTGCATCATCTTCTCTGCTCTTTCTCTTCCCACTCTCCTCTCTGGGGGAGA
AATCTTCCAGTTCTGCAGCTTTCTCCCTTGCGAGCGCCACTACGCTTTCAGGGAAGTTGGCAAACTCAGCCACATGGATCCCAAAGCTCTGGTC
ACATGCCCCTGGTTCAACCTTGTAAAGCATGGTGAGTTTGCGGCTTTCTGTGTCGATGTGTGCGCTGACGTGGAAGTTTGCAACACCAACGGTG
TTACCTGCAACCTCAGAGTTCGCTTGAGCCAAGGCAGTAAGTTCATGAAAGTGAGTAGCAAACAGAGTAGGAGCTTTCTTCACTTGAACCAGAT
GCTCACATATAGCCCATGCTAAACCAC |
Primers for UN44754 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGCCTAATCAGTAATCCCA |
59.916 |
20 |
AGCAGGTCCTCTGAAACAGC |
59.604 |
20 |
145 |
28 |
172 |
2 |
CCGCCTAATCAGTAATCCCA |
59.916 |
20 |
ACGCCTATGCGAGTTGAAAG |
60.407 |
20 |
204 |
28 |
231 |
3 |
CCGCCTAATCAGTAATCCCA |
59.916 |
20 |
GCTCAAGCAGGTCCTCTGAA |
60.678 |
20 |
150 |
28 |
177 |
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