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Simple sequence repeat (SSR)
>UN04102
GGAAAATAAGAAATTAGGTTAGTCAATCATCCCCCAATTCTTCTTCCCTCGCGTTCGGTGCCCTGTTCATCTTCCGTCCTGTGGATCGTGATCT
CACGGTTGAAGCCAACCTTACTGCCTCGGAGTCGCTACCTCTCTCTCTCTCTCCGTCGGAGTCACTACCTCTCTCTCTCCGTCTTTTCGTCAAA
CCCATCTCTGATACATCACGCGAGCGCAGCAGGGATTGGTGGAAGCAACGATGGGTGTATCAAACAAATGATGGAACTGCAACTACGTCTGAAG
ATTTAAAGGAGAATCTGAACCAATTCATAAACTCTATTCAGAAGACTTTGGGACTCCTTCATCAGTTACGCCTTACTGTCTCTTCTTTCACACC
CGCCTTCTCAGCCTCAACTCTCTCGTGTCGGAGCTGAATAGCATGGCTAAGTTGTCCGAGAAATGCAACATTCAAGTCCCCATGGAAGTTCTTT
GTTTGATTGACGATGGAAAGAACCCGGACGAGTTTACAAGCAAGGGATGTTATTAATAGCTGCATCAAGTTACAAAAGGCAAAACTGATGCTTT
TAAGGATTTGAGAAAACATATTCTGGAGGAGCTTGAAGAGACTTTCCCTGATGAAGTTGATAAGTATAGAGAGATCCGTGCTGCTTCTGCGGCT
GAAGCGAAACGGCAGGCGCAATCTCAAAGTGTCTTGTTACCCAATGGGGATGCTAAGGTCAAGAACGAGATTCAGAAGCTCTATCATCACCATG
GATGCAAAAGGAAAAGGAAAAATGGTGGAAGAACTTCCGATGATGGGTGAAAGCTTCACCTCCAGTGAGAGTCTTCCCCTCCTTGCTGCAACCG
ATCATGAAACCGATCATGAGGATGTGGGTGATGCAAAAGTGACCACATCTCTGGGAGAACTTCAGATCGGTGAAAGCTTCACCTCCAATGAGAG
TCTTCCCCTCCTTGCAACAGAACATGCGGAGGAGGTTGTTCTTTTGGATCTCCCCCCCCTTGTTGTTGACAACAATGTGCACATTGATGATGAG
GCTCAGGAGGAGGTGGAGGAAAACGTTTTGCCCGATGTTGGAGCTCACAACATCCGTAACGTCCGAGGAAGGCCTAAGAGGAGACCATTCACTG
AGCCCCTCTCCCCACGCTCTCAAGCTAGGGCCAATGAGAGGGAAGCCAAGAAAGAGCGCTCAAGAAAGCTGAGAACAGAAGAATCAAAATTAAA
TGTGCCAACCACGATG |
Primers for UN04102 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGTGATCTCACGGTTGAAG |
59.831 |
20 |
ATGGGTTTGACGAAAAGACG |
59.971 |
20 |
108 |
86 |
193 |
2 |
AATTCTTCTTCCCTCGCGTT |
60.208 |
20 |
ATGGGTTTGACGAAAAGACG |
59.971 |
20 |
158 |
36 |
193 |
3 |
TGAAGCCAACCTTACTGCCT |
59.875 |
20 |
GCGGGTGTGAAAGAAGAGAC |
59.851 |
20 |
279 |
101 |
379 |
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