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Simple sequence repeat (SSR)
>UN44819
GCAAACGAAAGAGAGATTTATACCCTAGACAATAATAATAGAGGTGGGAGAAACATAGATAAGAGGACACATTTGGCAGCTTGAGATACAAGTC
AAACATATACATGAACAAGGAACAGAGAGACAGAAAGAATCAGCCAAAGAAGCTAGGATCGTAGCCATTGCTAGAAGTGGCCAAGACATAGTAA
GCAACGATGTGACCAATAGAACCCCCAAGCAAGAACATCCACAATGTTGAATCCAACTGGATCGTTCGACTTCAAGAGGCTAACATACTCCTTA
GCACGATCATCTCCGGCTTCGAAGTGGGTTTTCCCGTTCTGCTCCGGCACCTGCTTAGCCACGTTCTCTCTCTGGAAGTTGAAGAAGACGAACC
GTCCTAGGAAGAGGGAGAGACCGGTGCTGAGGCTTATGACGACGGATGGGCTGAGCTCGGCTCTCACGACGGCGGAGGAGGAAGATCTCCTTCC
GGAGGTGGTGGATAGCTTCGGTAAGGAGGATGAGCCACCGAGACGGAGAGGACGGAGGCCGTGGAATGAGATGGAGTTTGGGGTTTTCTGAGAG
ATTGCTTTGGAGAGGGTTGTTGTGGGTGAGAGCAAAGCAGATGCGCTTGTCGTAGCATATTATCTTCTTCTTCTTCTTTGGAGAGTTTCAGTGC
AAGAGAGAATCC |
Primers for UN44819 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTGGTGGATAGCTTCGGTA |
59.955 |
20 |
GGATTCTCTCTTGCACTGAAAC |
58.055 |
22 |
197 |
474 |
670 |
2 |
CCGTGGAATGAGATGGAGTT |
59.927 |
20 |
GGATTCTCTCTTGCACTGAAAC |
58.055 |
22 |
142 |
529 |
670 |
3 |
TTGCTTTGGAGAGGGTTGTT |
59.711 |
20 |
GGATTCTCTCTTGCACTGAAAC |
58.055 |
22 |
105 |
566 |
670 |
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