Simple sequence repeat (SSR)
>UN44822
CTTTAAATCGGCAAGTCCTTGACACAAACTTCAACTTACAAAATGGAGTCACAACTCCAACACACTTGGAAACACAAAGCAAAAAGATGAAGGG
AAAAGTGGGTTTGTCCTGATCAAGGATATTTGTTGATATTATTTATATATATAGTAATTATTTATGACGGTAGTGACGTCTCCTCCTCCTCCTC
CTTCAACCTTCTTAACAGTCTTCTTCTTCTTCTCATCCTCCGCCTTATTCACCTCCTTTTTCGGCAATTGCTTCGGCTGTGGATCCTTCTTCGG
CAATTGCTTCGGATGTGGATCCTTCTTCTGCAATTGCTTCGGCTGTGGATCCTTCTTCTTCTCGTGGCCGTTGTACATCTTTCAATATTTTTGG
TATGAGAAACTAATTGAAGGAAACCATCTTTTTAAATAGACTTTTCATTATAAGACCAATGGATGAAACTTATGGTACAAGGGGTTAACGCGTA
TTATTGTAATAGAATGCTTACAACACATATTTCTATTATGTTAAAGGACAATTGACAATCC |
Primers for UN44822 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGAAGGGAAAAGTGGGTTTG |
59.942 |
20 |
GAAGAAGGATCCACATCCGA |
60.011 |
20 |
223 |
88 |
310 |
| 2 |
GGGAAAAGTGGGTTTGTCCT |
60.204 |
20 |
GAAGAAGGATCCACATCCGA |
60.011 |
20 |
219 |
92 |
310 |
| 3 |
AGGGAAAAGTGGGTTTGTCC |
60.204 |
20 |
GAAGAAGGATCCACATCCGA |
60.011 |
20 |
220 |
91 |
310 |
|
|
