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Simple sequence repeat (SSR)
>UN44838
AGTGAAAGAAACCCAAACTTACTTTTATATTGATATTAGGTTTATGAAAAGAGTGATTCATCAACCAAACATTCGAACGGTTTGTATCTTTCTT
ACATGAGAAAAGATTATTCTTTAGAAAAGTTACGACATTACATCAAAGCACTGATTGTTGTTTACCACACCGTTGTTAAGAAAAGTGAAACTGC
GATTAAAGTTTGTGTATCTTCAGGACTTGATGATGATCACTTCTTACCACGGAGTTTAGCTCCAAGTGCTCTCTCAAGCTTAGAAAGGATTTGC
TGGTTGGGGATTGCTTTACCAGACTCGTACTCTTGGATCACTTGTGGCTTCTCATTGATGATTTGAGCAAGTTGGGATTGGGTAAGCTTCTTGT
CAGTTCGAGCTTGCATAATGGCTTTCTTTAGCTCAGTAGGCACACGCTCATGAGCGAGGTTCTCAGTGTCGTCATCAAGCCTCTTAGTGTTGAG
AGATGTGCCACTTGAGGCTGCCTTGTTGGTTCCAGCATTGTATTTTCTGACGGATTCGATATCTGCGCCGGATCGACGAGCGGCGTTGACGGTT
TTCTCGTCGCGTTTGGCGGCGGAGTTAGGGGCTTTCTTGCGGATCACCACCGGCTCCCAATCTTGTGTCAGCGGTCCAACTCCTGCCATGATTT
CTTCTTCTTCTTCGAGCTTGACAAAATCTAGGGTTTCGTTCGTCTCCAGATATTAGGTCCATCTGATTCTTTTAGCTTTGGATGATTAATATAG
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Primers for UN44838 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGATGTGCCACTTGAGGCT |
60.418 |
20 |
TGGAGACGAACGAAACCCTA |
60.626 |
20 |
237 |
470 |
706 |
| 2 |
CAGTGTCGTCATCAAGCCTC |
59.42 |
20 |
TGGAGACGAACGAAACCCTA |
60.626 |
20 |
267 |
440 |
706 |
| 3 |
CTCAGTGTCGTCATCAAGCC |
59.42 |
20 |
TGGAGACGAACGAAACCCTA |
60.626 |
20 |
269 |
438 |
706 |
|
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