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Simple sequence repeat (SSR)
>UN04113
TCAATCGTCTCTCTCCCGGAAGAAGAAGATAAGAAAAACAAACATGTGTAGTAAGATGGCGTTTACTCTGACAATCCCTCGATTTCACTCTCCA
ATTTCTCGCAAACCCACCACCACCACCACTTGTTCATCTCCTCCTTCGAGGACACACTCTGCTCACTTCAGCCATGAACGATCCATTTCTCTCA
GACGAAGACTTTTCTTATTACCCGTCAAAGCCACTACCGATCAGTCAGGTCAGGTGGGTGGGGAAGAAGTTGGCAGCAAGATCTTACCCTTGTA
GCATCAACAAGAACGAGAAGAGATCAATCGGTGAAATGGAGCAAGAGTTTCTCCAAGCGATGCAATCATTCTATTACGAAGGGAAGGCTGTTAT
GTCTAACGAAGAGTTGATAACTAAAAGAAGAGTTGATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCCGATGAACAAAGATTCCTTGAAGC
TTCAATGGCTTATGTGTCTGGCAATCCAATCATGACTGATGAAGAATACGACAAGCTGAAAATGAAACTAAAGATGGATGGAAGTGAGATTGTG
TGTGAGGGTCCAAGATGCAGTCTTCGTAGTAAAAAGGTTTACAGTGATCTTGCAGTAGATTATTTCAAAATGTTCCTGTTGAATGTACCAGCAA
CCGTTGTTGCTCTCGGACTGTTTTTCTTCCTTGATGACCTTACTGGTTTTGAAATCACTTACTTGCTCGAGCTTCCGGAACCATTCAGTTTCAT
TTTCACATGGTTTGCTGCGGTGCCTGCAATTGTGTATCTGGCGCTATCACTCACCAAGCTGATCATCAGAGACTCCTTGATCTTGAAGGGCCCT
TGTCCAAACTGTGGAACAGAGAATACATCCTTCTTTGGAACAATACTATCCATCTCCAATGATGGTTCCACCAACAATGTTAAATGCTCCGGAT
GTGGAGCGGCGATGGTCTATGACTCAAGTACTCGTTTGATCACATTGCCAGAAGGAGGCAATGCTTAAACCCTATGGGCCAAGGTTTCATTCTT
AGGGGAATGTATGTAAAATCGATACTAATAGATGAAGAAGGTGGAGAAATTAAGCAAAAGAGTTTGTTCTGTGTGCTGTTTTCTATAATTGCAG
ATGTTTCCATGTACCTCTCATTGACTTTATTGTGTGTTGTAAGTAAATGTGAGGTGAAATCAGAGAACGAACACC |
Primers for UN04113 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTCGATTTCACTCTCCAA |
60.187 |
20 |
GGTAGTGGCTTTGACGGGTA |
59.993 |
20 |
151 |
76 |
226 |
| 2 |
CCCTCGATTTCACTCTCCAA |
60.187 |
20 |
TCGTTCATGGCTGAAGTGAG |
59.984 |
20 |
100 |
76 |
175 |
| 3 |
CCCTCGATTTCACTCTCCAA |
60.187 |
20 |
CTTGCTCCATTTCACCGATT |
60.074 |
20 |
252 |
76 |
327 |
|
|
