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Simple sequence repeat (SSR)
>UN44922
GAGAAACACAAAAGATGTTCAAAATTATTACATATGTATTATTACAAACGTCTCACATATTTAACTTAAGTTCATTACATATAATTATAGCATA
TAAATCGTATCTACACACCAACATATGATGCAGATCAAAACAGACAATTAAAAGAAAAATAGTAGATATGAAACAAATACTTTCATAGTAAAGC
CCACAATTAACACTCATCAATGTGTTAATCAAATATACGATCATTACCTCTTAATCTTTTAACTTCAAGCTCTACTCTTGCATTTCTCCATTGC
TCTCGGAGCAAGACCAATGGCGTCAGATCCTTTCATGAGACGTAAACGCTTGCATGTATCAACGAACATTGGCCAAGGGACGTCGCCGACGAGC
ATCCAATCACCGTCTTTGTCTTCGTAAGAGGGAACATAGTCCCAACCATTCACTATATCCATTACTTTCCTCTCATTCATGAAGTCTATCATTC
CTTCTTCTCCTCCATTTTTCCCCATGGTAAAAGAGCTGAACATGTTAGACAAAGCATTAGAGAGTTCGTCGTAGCTCTTATACATCTTCAAGTC
GACTTTCCTTAAGTACGGTGCTCCGTCCATTGAAACCTTCACAAACGCCCACAACTTGTGCCTTGGCTGGAGGCTTGGCTGGATCTTTGGGACA
TGAACTCTTTTCCTTGGAAACAGAAGCCACGATGTCATGAGGCTTAGATCCTCCCTTGCTTTCAGGTTCATTGTTCAGATTCAGCTTCAGATCA
ACCGTCTCCGAGAAGCCTCTCTTGGTTCCAGTCACTGGGGCCGCCGTATCCCCGCCGGGAAGACCAAGACACAACTCAGTCTCCCTCAGATTCA
GCTCGACACTGCCCATCATTGCTAATCTCTCTTCTTTTTCAATAATCTTCTTCTTCTTCTCGGGAAGGTGATGAGGAAGATGGGGAAATGGTTT
TTAT |
Primers for UN44922 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCCTCCCTTGCTTTCAGGT |
60.074 |
20 |
AAACCATTTCCCCATCTTCC |
59.996 |
20 |
235 |
706 |
940 |
2 |
GGAAACAGAAGCCACGATGT |
60.119 |
20 |
AAACCATTTCCCCATCTTCC |
59.996 |
20 |
267 |
674 |
940 |
3 |
GGCTTAGATCCTCCCTTGCT |
59.811 |
20 |
AAACCATTTCCCCATCTTCC |
59.996 |
20 |
242 |
699 |
940 |
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