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Simple sequence repeat (SSR)
>UN44944
TTTTAGCAAGAACAATAATGTATATTTAATTGATGTAGCCAAAACAAAGTTGATAAGAGAAACTCAACGAGAAGAGGAGGAAGAGGAAGAAGAA
GAATTGAAGTTAACAACAATCTAACACGAACAGAAGGTTTTTGTCGTTGTCATTTGTTGAAAACTACTCTGCTCAACCGATCTGCTTCCTTACT
TACCATTGCGATTTTTGAAAACAGAGCCCGAACCAGATTCAATAGAAGCAAAGCCATTTCTTCTTTTCACGTGGGGGTGGCGACGAATTACGTT
TCTTGCGATGGTTGTTGTTCTGTTGATGACGATGATGACGACGGTTGTTGTTCTGTTGAGGCTCGTTGTTTGTTGGAGGTGTAACAAGACTCTC
AGGTCCCGCAACAGCTGTTTTCTTGGTCTTCTTGTCGTCACGAGCGTTGTTGAAGATGACGGTGAATCCTTGGGCGGCGCCTGGATTAGTCGCC
GCGTCCCATTCCCCAAATTTTGGCAGTTGTCTTCCTTTGTTTCCCGTTGCCATTGTCGGTATTAGAACAGAGGATCTTGGTTCTGATACGAGGA
GAAGCCAGAATCTAGAGAGAGAGACAAAGACAATGATGATAATCTGGGAAAATAGGAGATGAAATTGTAATAATAGAGGAGGAGGAGGAGGAGG
AGAGAGGACGATCACGTCGTCGTTGGAAACGCATCAACAATCTCCTTTTTTTTTTTTTCATATACACACCTTTCTCTTTCCCCC |
Primers for UN44944 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTCTTCCTTTGTTTCCCG |
60.081 |
20 |
GATTGTTGATGCGTTTCCAA |
59.523 |
20 |
204 |
497 |
700 |
| 2 |
TCTTCCTTTGTTTCCCGTTG |
60.081 |
20 |
GATTGTTGATGCGTTTCCAA |
59.523 |
20 |
201 |
500 |
700 |
| 3 |
CGTTGTTGAAGATGACGGTG |
60.152 |
20 |
GATTGTTGATGCGTTTCCAA |
59.523 |
20 |
280 |
421 |
700 |
|
|
