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Simple sequence repeat (SSR)
>UN44956
GCCAGTAAAAGGATCATGTTTTCTAGTATAAAATCCAGTTTTACAAAAGTTGATAGTGTCTTAAAAGATAGACACAAACCCCAACAAAAACAAG
CCGACAGGAGAAAGGAGACCAACTAGATTGTCCAGAGCGCATAATACTAAAACGATAGCAAGATGAAGATGTAACTCCATGGCGTAATGTGTAT
AACTTTGAGAGTAACGAGAAAGAAGTGATAATAAGAGTGAGGTGAAACCTCAAGGCCGAGACAAACGGGAAGTTGGGTCTTGGTCTGTTGCCTC
ATGGCAGTAGAGGAGTCTTTGTCAGTCATGTAAACGGAATAACCCAAACATCCGTAGTAAAAATCAGCTAAGGTGCGCCCTTCTTTAGAAGCTT
CAGCTTCAGATTGTCCTACAACGTAATCAGGAACTTGACGGAGAGTACGAGGGATGCCGACGCAGCGAGGATTCTTATCCTTGGATTTGAGAGT
TGAAGAGTAGTAAAGGTATCCTTTGCACGATCTTCCTTTCGCCACCCCTCTCTCTTCCGATTTCTCTTCCATTACCCTCCTATTCTTCACTTCT
CCGCTTGACCCTTCGCTCATTCTTCCTTCTTGATCGCCTTCCAACTTGTCCTCTCTCTCTCTCTATGTTTTAGCTCATCTTCAAGCTCATTGGT
CCCC |
Primers for UN44956 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTCACTTCTCCGCTTGACC |
59.989 |
20 |
GGGACCAATGAGCTTGAAGA |
60.195 |
20 |
107 |
555 |
661 |
2 |
CTTGACGGAGAGTACGAGGG |
59.861 |
20 |
GGGACCAATGAGCTTGAAGA |
60.195 |
20 |
252 |
410 |
661 |
3 |
CCCCTCTCTCTTCCGATTTC |
60.147 |
20 |
GGGACCAATGAGCTTGAAGA |
60.195 |
20 |
147 |
515 |
661 |
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