Simple sequence repeat (SSR)
>UN44973
CCAAATTTCTAAAAAAAAACCATTTGCAAAGTTTTGATCTTTTTTTTAACTCATAATCAGTGGTAGGTAGGTCAGATATCACACGCTTAGTCCG
TTCTGATTCAGATACAGAATGATGACATAAACGATGCCACCTAGTGGAGAAGAAATAAGCTCGCACGGGGAGAGAAAGCATGGTTTCCCCCCCC
CCCCTCTAAGCCGCCGTAACTCCCATCACCCACCTCAAAAGGCAGGTCCTTTTCACCACACTCCTCCGGATGCTGATTCTGGTTCTGATTCTGA
TTCTGGGGAGGAAGAGAAAGCCCGCCCTCACTCACATTCGTAAGTATGCGACGAGAAAGTGCAATGGAAGAGAGAGAGAGAGAGACTGCGGTTT
CTGCTTAGGAGGGAAGATCGAGAAGACAAGTGTACGGACGGAATGGCCTAGGGTTTTAAGGTGGACGTCAGAGCTCCTCATCATTTTGATC |
Primers for UN44973 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAGAAATAAGCTCGCACGG |
59.982 |
20 |
TCGATCTTCCCTCCTAAGCA |
59.91 |
20 |
255 |
143 |
397 |
| 2 |
TGATTCTGATTCTGGGGAGG |
60.003 |
20 |
TGACGTCCACCTTAAAACCC |
59.83 |
20 |
173 |
274 |
446 |
| 3 |
AACGATGCCACCTAGTGGAG |
60.134 |
20 |
TCGATCTTCCCTCCTAAGCA |
59.91 |
20 |
274 |
124 |
397 |
|
|
