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Simple sequence repeat (SSR)
>UN45008
GGAACTAAAATAAATTTTATTTATAATTAAAATTGATTTACAAATTTAAACCTGTTTACAAAACTGAACCAGATATTAAAACTAAAATCAAACC
ACTACAATTTTTCTATCTAAACCAATTTTTTTAAAAAAACCTAAACCTAAAAAAAAAAGACTCCAGCCGCCTGATGTTCTCTTCTCCAGCCTCT
GGCTCTGTCTTCTCTCCGATCTCCTCTTCGCCTCCCGGATCTGTTCTCTCCGCTTCAACCATGAGCAAAGAACAATCCAAAGTAGCAGACATTA
ACACTGTTTCGGTGATGGAACAAAAGAGAGACCTCCAGTCATCTCGTCTCGTCAGGCCTCTCATGCTTCTTCCAACTTACTTTACCAAAAAAAC
AAATCAAAATCAGATTCAAAGGAGAGAAAGAGAGAGGGAAAGAGCACTACAAGAGTGGAAAGGAAGAAGAGAATCAGATCGTGGAGAGAGAGAG
AGAGAGAGAGAGATGGCGGATGGTGGTGGTGATGAATCTGAGAAGCAATGGTGGTGGTGACGAATCTGAGAAGCGATGGTGGTGGTGACGAACG
ATGGCGGATGGGAAAGATGACGATGTTGGTTGTGGTGGTGACAAGTGAATGAGCGGTGGTGGTGGTGACGAGCAGGAGGAGAGATGGTGGAGAA
GTTCAAACGTTATGGATGATTGGAGGAGAAGGAGGCGTGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCC |
Primers for UN45008 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAGGCCTCTCATGCTTCTTC |
60.096 |
20 |
CACTTGTCACCACCACAACC |
59.89 |
20 |
277 |
335 |
611 |
2 |
TCAGGCCTCTCATGCTTCTT |
60.096 |
20 |
CACTTGTCACCACCACAACC |
59.89 |
20 |
278 |
334 |
611 |
3 |
CAGGCCTCTCATGCTTCTTC |
60.096 |
20 |
ACTTGTCACCACCACAACCA |
59.89 |
20 |
276 |
335 |
610 |
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