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Simple sequence repeat (SSR)
>UN45021
GAAAGAAACATGCAGGCTCCATATAACCTCAAGACTGAGAGTGTGGCGGGTAAAGTAGATTACAAAAGTTCTTTGGTGAAAATCTGTCGAAAGC
ACTGAGGATAGGGCTTGCCACATAGACATTGTTCAGAATGTGTAATTGACCTAAAACGTTTTGTGACGAAAATTGAAAGAAAAAGTAAAAACCC
CACGATAAAAGACAAGACGTATCAGTTATGCAAGCTCATGAAGCTTGGTGTCAATTCCAACCGTCACTTTCATTCCCATTAGCACCGACCTGGG
GAGGTTCTACCACAGCATGTGAGCTTCCTGTCGAATCCGGGAGCTGGATGGAATGGTCAAATCTACAAGCTGGGCCAAATTTGCAGATGCCGTA
GCGACTGTAATGTGTGCAGATGACTTGATCCTAGATTTCAGTTCAAGTCAAAAAGAGTCCATCAAACATCAAAGAAGAGAGAAGCAGAGAAGGA
AAAAAAAAAGACAAACGAGCTTACAGGCCTAAGGGGCAAGCCCTTGTCATTGAGAGCATAAGGAGGCTGTTTCGGCAAACGATTCTTAGGATGA
TGGTATTTGCAAGTGAACTTGAACTTACAATCCCCAGTTTTAAGATAGTAACTGCACTCAGGCTGGTCCGGACGTTCTGGAAACTCCTCAGCAG
GTTTTTGATATTTGTATGGTGTGAAAATACTTGTTTCAGCTGATGAGTTGTTGTTGTTGTTCATAAGGTATGTGGTGGAAGTAGAAAACACACT
CCTTTCTGATGGATACATAGTAGTAGCAGCCTGATAGCCATTCCACTCGGGAGTTTGAGATGAAGCTCCACGACTCTGAGACAACATGGATGGA
ATAAAAGGAGCAGTGCCGTTGGTATC |
Primers for UN45021 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTTCTGGAAACTCCTCAGC |
59.989 |
20 |
CGGCACTGCTCCTTTTATTC |
59.845 |
20 |
228 |
637 |
864 |
2 |
CGTTCTGGAAACTCCTCAGC |
59.989 |
20 |
GCTTCATCTCAAACTCCCGA |
60.34 |
20 |
182 |
637 |
818 |
3 |
CGTTCTGGAAACTCCTCAGC |
59.989 |
20 |
GAGTGGAATGGCTATCAGGC |
59.658 |
20 |
164 |
637 |
800 |
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