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Simple sequence repeat (SSR)
>UN45052
GGGAACAAAGCAAATAATAAGAAGAAGAGTCTTCCGTAGATTTGGTCTATATGAGGGAGGTGTATGGAAGATCAAAGTCGAACTTCCTGAAGTT
TATCCTTATAAATCTCCTTCTGTTGGTTTCGTTAACAAGATTTATCACCCCAATGTTGATGAATCTTCGGGTGCTGTTTGCTTAGATGTAATAA
ACCAGACATGGAGCCCAATGTTTGATCTTATCAATGTCTTCGAGTCATTTCTTCCTCAACTGCTTCTATATCCAAACCCATCTGATCCATTCAA
TGGAGAAGCTGCCTCTCTCTTGATGCGAGACCGTGCAGCCTATGAGAAGAAAGTCAAAGAGTACTGCAAAGCATATGCTAAACCAGAGGACATA
GGAGCACCTGAGGATTTAAGTGATGATGATGAAGATGACGATGATGATGATGATAGCATGAGCGAACGTGGTTCAGACTCTGATGACAACGGCG
ATGAAATCGCTGGAAAAGCAGATCCTTGATGATGACTTGTGTGTGTGTTACAAATCAACCTTTCTTTGCACTTCATTTCCATATATATAAACCC
ATTGATGTTCATTCCATATAGAGGAGAAAAAAAAAATCACTCCTCTGTAAATTTGTAAACACTATTTAATTCTTTAGGAATATTGAAAA |
Primers for UN45052 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCCAAACCCATCTGATCCAT |
60.135 |
20 |
CAAGGATCTGCTTTTCCAGC |
59.955 |
20 |
240 |
259 |
498 |
2 |
ATCCAAACCCATCTGATCCA |
60.135 |
20 |
CAAGGATCTGCTTTTCCAGC |
59.955 |
20 |
241 |
258 |
498 |
3 |
AGCTGCCTCTCTCTTGATGC |
59.857 |
20 |
CAAGGATCTGCTTTTCCAGC |
59.955 |
20 |
210 |
289 |
498 |
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