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Simple sequence repeat (SSR)
>UN45113
CGTGAAACTTTTGATATATAAAGCATTTTAGCCCATCGCGTATTTCACAACTTTCCAGCGTTTATACATACACTGTTACATTACAACTGAATCC
GGTTAAGGAACAGCACAGAGAGAGAGAGAGAGAGAGAGAGTTTATATAGAATCAAACCAATTACATGTTGATGGAGAATTTGTCCTAATACTCT
ACAGCAGAAGTGATATTATATGTATATAGAGAGGAGGCTCAGCCTGACCTCGCTGCATCAATAGCTGCAAGTAACTCATCAAATTTAGCCCCGA
CCACTTCCGTTATCACCTTGCTGTCCTTCAAGATCTTAAAGGTTGGAACCACTTTAATTCCTAGCTACTTTGCCACTGGCTTGTTGTCTTCGTT
ACAGTCAAGCTTAAGAAACACCATGTCCTGGTACTTCTCTGATAGCTCTTTGTATTTAGGAGCCATAACTTTGCAAGGTCCACACCACTGAGTG
TACATGTCGAGGACAACAATCTTATCACCAGCGGCTTTAACGATTGGCCAAAACGTGTCCTTGTCAACCTCAGTCACCTCGCCGACACTGACAT
TCACTGTCTCTAAGCTACACTTCACCACACGGGAACCCATCCTCTTCCTTAAATCTAACACACCACCACCTCCCAAACAGAATCCTGTATTCGC
CGCCGCGACGCCTGAGTTCGGGATCCGGCAGCGCTGCTTCACCGGACACAATCCTACGGAGGTGGTTGCCGGAGCCGGAGAGTAACGGAAAGAT
ACCGGTGACGGAGCGATTCGGAGACAGAGGGTCATAGTTGAAGAAGCTCGAATCCAAAAGCTTGTTTAGAATCC |
Primers for UN45113 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTAGCCCATCGCGTATTTC |
60.061 |
20 |
AGCTATTGATGCAGCGAGGT |
60.007 |
20 |
228 |
27 |
254 |
2 |
TTTAGCCCATCGCGTATTTC |
60.061 |
20 |
TATTGATGCAGCGAGGTCAG |
59.972 |
20 |
225 |
27 |
251 |
3 |
TTTAGCCCATCGCGTATTTC |
60.061 |
20 |
CTATTGATGCAGCGAGGTCA |
59.972 |
20 |
226 |
27 |
252 |
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