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Simple sequence repeat (SSR)
>UN45125
GGATTGCCAAACCTTCATTTTCTACTTCTCTTCTTCGCCTGAGTTCACTCCTTACGTACAGACGAAATCGGACAGAGCTCGGGATAACACGGAG
TCGTACGAATTACTTCGTCGGCCGCATGTTTCATGCAGAGAATCATAAGACGAGAAGATTCCCAGAGAGAGAGGTTCTTTTACAACGTATGTGA
GTCTCTTCTCTCTCTCTCTGTAAACCCTAACCGCAAGAACGATGCCAGGTCCCCGAAACGAGCTCTCGATCTCGTCTCCCCTGTCCATGGCCAA
TTCCCTCCTATCCTACTGATTCTGAAGCATTGCATTCCAAGGTGGACGAGGACGAGAAGAATCTCGTTACCAAACCCGCCGTCTTCAAGGGCGT
TCTCCTTCAGCAGACTCTTCAGGCCATCGTCTCCGTTATTCTCTTCAAGAGAGCAGAAAAGAAAAGCAGCAGTTTTAATGGAGAGGAGGACTTC
AGGAGGAGTAACCAGTGCTCCTTGAGTTATCGTGAGTTTCACTTCTTGTTCTTAGGAACCTCGTTTTTGCTCCGAAAGTTACACACCCTTTGTT
GTTTAGGATGATAGGTCTGAAAACTTCAGATAAACTCTTGAGTAGGAAATTATAAATTTCATACAGGAACAGATAAATATTGTTTCATTACATT
TGCTTACAGCTTGAGAAGCATGAATCATTTTTAAGA |
Primers for UN45125 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGACAGAGCTCGGGATAACA |
60.218 |
20 |
CGAGATTCTTCTCGTCCTCG |
60.088 |
20 |
279 |
70 |
348 |
| 2 |
GGACAGAGCTCGGGATAACA |
60.218 |
20 |
CTTGGAATGCAATGCTTCAG |
59.42 |
20 |
254 |
70 |
323 |
| 3 |
CGTACAGACGAAATCGGACA |
59.716 |
20 |
CTTGGAATGCAATGCTTCAG |
59.42 |
20 |
269 |
55 |
323 |
|
|
