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Simple sequence repeat (SSR)
>UN45234
TTTTGCCAAAGGAGCATATCACTCAAAATAAATATCCAAAAAGTAATCTCTACACCATTGTCCTCATGTGGTTTCCTAGTTAAAAAAAAAACAA
CATAAAACCACATGATGACTTCTTTTTCTTACATGCACAAATAATCTCCCTTAGAAAAGAAAGAACAACAATGAAGCAAATTCAAGAAAAATGG
GTAAAACTAAAGAATCTCTAGTAAAAAAATAAATAAAAAACAGACAGAGAGATGATAAAGAGAACATGACCGTAGCTTTCCCACAAGTTCCGAC
AAAACTTGAAGAGTTACTATAAAAAGATATACAACTTTACAGGAGACAAAAGGGATCGGTGGTGTCCAAACGAACAATACTGATGATGATGATG
ACGGGATGGATATTACCATACCATGAAGATTAAAGCTGTAATTGACCAGGTCCTTTCCTTGAGGATCTTGATGGAGGTCGATTGATGTCCGCAA
CTGATGGTGATGCCGAAGAAGCTGGCGGTTTATGTTGTTGTTGTTGCTGCTGCTGTTCTTCAGATCTCCTCACCTCCTTCGATGCAGAAGTAGA
TGAAGTGTTATATGAGTAGTTCACTTTATTCCTTGCCTGCCCACGATGCTGATTCTGTACGTTCTCAAACTGTTGCAGCCGTGCAGCAAAATTG
ATTACTTGGTGAGAATTGTTGATGTTATTGTCTTCCGCGTCACCGTCCTCGCGGTGATGCATATACTGAGAGAAAGGAACTCCTGAAGATGCTC
TGCTTATTTGGCCTCCACCACTGAATGAGTATGTTGGCACAGTTTTGA |
Primers for UN45234 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGAGACAAAAGGGATCGGT |
59.935 |
20 |
CAAGGAAAGGACCTGGTCAA |
60.081 |
20 |
115 |
323 |
437 |
2 |
AGGAGACAAAAGGGATCGGT |
59.935 |
20 |
ACAGCAGCAGCAACAACAAC |
60.104 |
20 |
204 |
323 |
526 |
3 |
AGGAGACAAAAGGGATCGGT |
59.935 |
20 |
CATAAACCGCCAGCTTCTTC |
59.845 |
20 |
182 |
323 |
504 |
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