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Simple sequence repeat (SSR)
>UN45242
GATAGGTCTTATTATACGGTTTCAAACATGAAGGGTTCTTGTAGAGTATACTATATGCTTCCTTCATAAGAACATTTGAGCTGTACCAGTAGCC
TCTGATGTTTTCATTATCCGGAGTCTTTTCACAGAACCAATAAACATCCCCCAGGGAACATCACCAACAAGCATCCAATCTCCTTCCTTGTCTT
CATACGTTAGTACTAATCCAGAAGACCCATCTGGTAGTATCTTGATGACCCGTGCTTCCAGAAACATATCTTCGAGAGTATTGGACAGTGATTC
ATAGCATCTATGAGCGTTCAGATCGATTTTCCTTCCAATGGGAATACCATCCATAGTCACCTTCACAAACATTCTCATCTTTGTAGCATCGGTT
CTGTTTTTGTTTACTTCTTGACGGATCTCTTCCATTGCCAATGTCTTGGCTTGGTTAACCATACTGTTCATTCTGTAAGTCCTTATCGGTGGCC
ACCCCACAACTTGACCACTAGTTGCGGCCATCGAATCAGCTGTTCTCTTGATCCCAGCAGTCACGCTAGCTCTGCTACTCAAGGAAGAAGACGA
CGAAGAAGAAGAAGAAGAAGAATCAACAGCGTGAGAAACCCTACGTTCTCGACCTATGTTCAACGTGAGACCGAGCTCGAGCTCGAGCTCATTC
TCTGCCGGAGAAGAAGAATCCTCGCAAGAGACGACGAGGTGTTCATCGTTTGACAAGGTCGATGCCGACATATTAGCGGAAACGCCCTCCATTG
AATCAAAGATTGGAGATTTGATGGAAAGGGGGAAGGTGAGATGGGGAGATGGGTTGAATTTGAAGCAAAGTTTGAGACTTTTTAATAAGTAAGG
GAAAAACAGTGAGAAGGAACGAAAAATTAGGAAAAGAGGAAACAGAGGATGAACAAGACCAAGACACGACGGGTGGGATTTGTCCCTCCTTTTT
TTTTTCTTTTGCTTCCCTAACTTTCC |
Primers for UN45242 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTTGACCACTAGTTGCGGC |
60.321 |
20 |
GTCGTCTCTTGCGAGGATTC |
59.957 |
20 |
215 |
479 |
693 |
2 |
TCTCTTGATCCCAGCAGTCA |
59.499 |
20 |
TCTTTGATTCAATGGAGGGC |
60.014 |
20 |
248 |
514 |
761 |
3 |
TCTCTTGATCCCAGCAGTCA |
59.499 |
20 |
GTCGTCTCTTGCGAGGATTC |
59.957 |
20 |
180 |
514 |
693 |
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