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Simple sequence repeat (SSR)
>UN45378
GGAGGAAACATCAAGGCAATGTGCGTGTATATAACAAAACCTCAAGCTCTCTCTCTCTTTGGCTCACACCTTAAACTGAAAACCTAATTCGCTC
ATCGCTGCCGAAAGCTTATTCATCCATTCTTCGCTTAGTTTGTGATAATGTCTGCTGGTAAAAAAAGAACGTCCAGCTATCGGTATCGACCTGG
GTACGACCTACTCGAGCGTCGGAGTATTTAACTCTGGTCCTGTCGGCAACAAGACGACTCTGTCTGCTGGTAAAAGAGAACGTCCAGGGATCGG
TATCGACCTGGGTACGACCTACTCGAGCATTGGAGTATTTAACTTTGGTCCTGTCGGCAACGGCAACAGGACGTCTCTGTCTTACTTGCCCTTC
ACCGACTCCGAGAAGTTGATTGGTGATGCCGCCAAAAAGCAAGTCACCATGAACCCCATTAACACCGTCTTCGATGCAAAGAGATTGATTGGTC
GAAGATTCAGAGACTCATCTGTCCAGAGCGACATGAAGCTCTGTGACAGGTTGGCTGTGCCTTCGCCAATGATGGAAAGACTCAAAGCGGCTGA
AGTAACCGTTGAAGAGGAATAGAGGATACTCTCCATGAGAAAGAGAGTTTAGTCTATGCTTTATGTTTGCAATCTTATGTTTGCTACGTTGTAT
TTTAATAATGTGTACAGCTACTTAAGCTGATTACTCTCAGGGTGTAAGGTTTTATCGAATGATTATTTACAAATTATCTTAC |
Primers for UN45378 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCAAGGCAATGTGCGTGTA |
60.142 |
20 |
GGTCGATACCGATAGCTGGA |
60.059 |
20 |
176 |
10 |
185 |
| 2 |
TCAAGGCAATGTGCGTGTAT |
60.142 |
20 |
GGTCGATACCGATAGCTGGA |
60.059 |
20 |
175 |
11 |
185 |
| 3 |
TCAAGGCAATGTGCGTGTAT |
60.142 |
20 |
TCGAGTAGGTCGTACCCAGG |
60.126 |
20 |
193 |
11 |
203 |
|
|
