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Simple sequence repeat (SSR)
>UN45388
GGGTTAATCATCTTCTTCGTCTTCCGCCAGCGCTCCTCTCTCTAATCGAATTGAAGTTGTTTTAAGCAAGGGGAGGGAAGAAAATGGTTTCTGG
ATTAATCAACGAGAACCCGATCGTGTACGAGGTAAAACATCGTCGTGATGTTCGTGCCGATTCCAGCAGCAGTACCAATGAGCTCTCAGCAGAT
TCAATCGATCATCTCGAAGTTTTCGATCATATAAGAGATATAAAAGATCCAGAGCATCCTTACTCTCTGGAACAACTCAAAGTCCTTACAGAAG
ACTCTGTTGAAGTTGATGATACCAAGAGTCATGTTAGGGTTACGTTCACTCCAACGGTGGAACATTGTAGCATGGCAACTATTATTGGTCTCTG
TGTCCGTGTGAAGCTTATGCGAAGCCTTCCTCGTCGTTACAAGATTGATATAAGGGTAGCCCCCGGTACTCATGCAACTGAGGCTGCAGTCAAT
AAACAACTAAACGACAAAGAGCGTGTGGCGGCTGCACTAGAGAATCCGAACCTTGTGGAGATGGTCGATGAATGTCTATCTTCATCACTTGAAT
GATGCCCTTGATGCTCTCAAGATACACTTTCATATATATATATGTCTCTGCTTTGTCTGCAAATATTTTGATCAGCTAGGGCTTACTTTGTGTT
TAGTGTCATGTTTAATGAATGTATTTGATTTGATCCACTATGATTATTTCAGATACTCTCCAACCGAACTTGTTGCACGCTTGTCTTTCACACA
TTTGTTCCGTTGT |
Primers for UN45388 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGTGGAGATGGTCGATGAA |
60.048 |
20 |
GAAAGACAAGCGTGCAACAA |
60.035 |
20 |
225 |
523 |
747 |
| 2 |
GAATCCGAACCTTGTGGAGA |
60.05 |
20 |
GAAAGACAAGCGTGCAACAA |
60.035 |
20 |
236 |
512 |
747 |
| 3 |
GAGAATCCGAACCTTGTGGA |
60.05 |
20 |
GAAAGACAAGCGTGCAACAA |
60.035 |
20 |
238 |
510 |
747 |
|
|
