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Simple sequence repeat (SSR)
>UN45416
GGAGGCCCAGTAGACACGTAACGTATTTCATTTCCTTTTCTCTAAATAAGCCCAATTGTAAAGGACCAACCGACGCAACTGAATTTGTTTAAAG
AAACTTTTTTACTTTTCCCCTTTCTTTCCCAATTCCAAGCCCTAAAAATTTCGACCTCGCTTCACCACAGTAGCCGAGTGAGAGAGAGAGAGAG
ATGGCGCTGCAAGATGAGCAAGAGCACGAGGTGTACGGCGGAGACATCCCAGAGGAGGACGAAGGCGAGATGGAGACGGACGAGTATCTAGAAC
ACGCCGGAGAAGAAGAAGAAGGCGCCGCCGCCGCCGCGGAAGACGAGGAGGAGCTAGAGCCAGGCTCTGCTTCTAGGGATTTAGAGGAGATGAA
GAAACGAATTAAGGAGATCGAGGAAGAGGCTAGTGCTTTGCGTGAAATGCAAGCCAAAGCTGAGAACGATATGGCTGCTGCTCAAGATCCATCA
AGTGCTATTAGTGCGGCTGAGAAGGAAGAAGTGGATTTGCGTTCTATATATGTTGGCAATGTGGACTACGCATGTACGCCAGAGGAAGTCCAGC
AGCATTTTCAATCCTGTGGGACGGTCAATAGGGTTACGATTCTGACGGATAAGTTTGGCCAACCCAAAGGTTTTGCGTACGTGGAATTCGTTGA
AGAAGAAGCCGTTCAGAATTCTCTTGTTTTGAACGAGACAGAACTGCATGGTCGTCAGATAAAGGTATCTGCAAAGAGGACTAACGTCCCCGGG
ATGAGGCAATTCCGAGGAAGGCGACCCTTCAGACCCATGAGGGGCTTCATGCCCGGACCTCCATTTTATCCTCCATATGCTTATGGGAGAGTTC
CCAGGTTCAGACGGCCAATGCGCTACAGACCATACTGATTGAAGCAAATTTGGTGGTTCAAAAAAGTAGCAGCTGCCTTTTGTTTGAGGAAGGC
TATTTTTACCAACCTGGTTCATCAGGAGCAAAGTTGCTTCGCTTAAACAGAGATGGGTTTAAGAATTTTATGGAAGAGTGGGGCAAAGGAGGGA
ACTGTGTTTAGATTTCTGTAACAATATTTGATTTTCTTTTTCATTTGTCATAAAACTCAAAGCTTTCTATTGAGAATGACCTTCACGTTACTG |
Primers for UN45416 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCACCACAGTAGCCGAGTG |
59.897 |
20 |
GCATTTCACGCAAAGCACTA |
60.021 |
20 |
272 |
155 |
426 |
2 |
TTCACCACAGTAGCCGAGTG |
59.897 |
20 |
GCCTCTTCCTCGATCTCCTT |
59.919 |
20 |
252 |
155 |
406 |
3 |
ATCTAGAACACGCCGGAGAA |
59.836 |
20 |
GCATTTCACGCAAAGCACTA |
60.021 |
20 |
153 |
274 |
426 |
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