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Simple sequence repeat (SSR)
>UN45442
GGGCCGCCCGCATCTCTCTCTGTTTATTTATTCTTATCTCCTTTGCACTCTTCAAAGAGAGAAACCAGCTAATAATCAAATCTCAAGATGAATA
GGGAGAAGTTGATGAAGATGGCCAACACTGTCCGCACTGGCGGAAAGGGTACAGTCAGAAGAAAGAAGAAGGCTGTGCACAAGACCAATACAAC
TGATGACAAGAAGCTTCAAAGCCCCTTGAAGAGAATTGGAGTTAACTCCATTCCAGGAATTGAAGAAGTTAACATCTTTAAAGATGATGTTGTT
ATTCAGTTCACCAATCCTAAGGTTCAAGCTTCAATTGCTGCAAACACATGGGTTGTTAGCGGTTCTCCTCAGACCAAAAAATTGGAAGATATCC
TTCCTCAAATCCTCAGTCAGCTCGGGCCAGACAACATGGACAATTTGAGGAAGCTAGCAGAGCAGTTGAAGAAGCAACCTCCTGGTGAAGGTAA
TGCCTCGGCAACCATCAAAGAGAAAGTACCTGCTGCTGCTGCTGCTGCTCCTGCTGCTCCTGCTGCTGCTCCTGCTGCTCCTGCTGCTTCTTCC
TAGACAAGAAAAAAAAGCACTTGGATTTTTGCGTATCTTTATATATGTTTGTTCTCTCCATCCTTTTCTTTTGTAGTGTTTCCGACCAGACTCT
ACTTTCCCAGATAATGATTTTAAGTTTTTCTTTTTTATCTAAAAAAA |
Primers for UN45442 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CATGGGTTGTTAGCGGTTCT |
59.993 |
20 |
TAGGAAGAAGCAGCAGGAGC |
59.859 |
20 |
238 |
329 |
566 |
2 |
CATGGGTTGTTAGCGGTTCT |
59.993 |
20 |
CGCAAAAATCCAAGTGCTTT |
60.244 |
20 |
269 |
329 |
597 |
3 |
GCAACCTCCTGGTGAAGGTA |
60.111 |
20 |
TAGGAAGAAGCAGCAGGAGC |
59.859 |
20 |
117 |
450 |
566 |
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