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Simple sequence repeat (SSR)
>UN45539
GGATCACACAAATCTCAAAACACTCTTTCACTCATGAACAGAGCTTATCTCTTCTAGTCTCTCTTTCCTTTTTCTTCCGAGCTAGCTAACAAAA
AAGGGACATAACATAATGGAGTGGGAGGAACAAGGTTTGAGGATGTCCTTAGTGCTTGATAGCGCTTCGGTGCTAATGCTCACCGCTTCGGCTC
TAACGGCTACTGTGCTTTCCTCTTTGCTAGAGCTCCTCTCTCAGGTGGCTGCCTTGAAGGGTGATGTTAAAGAGAACGGAGACGAGGTTGTTGA
TGCAGAGGAAGGCAATGGAAACAATGAAGACGGTGATAGTGGTGATGATGAAGGAGGGGAAGGGGAAGAGGAAGAAGGTGGTGATGCAGAAGAA
GTAAAGGAGACCAAGAAAGGATCTGCAAGTGGTCCTGGTGAGAATGGTGAAGCTGGAGATGATGATGACGATGAACCTGAACAGGGTGACGACG
GTGATGATGATGATGACAATGGGAACAATGATGATGATGAGGAGGAAGTAGAGGAGGATATGGAGGTTCGGGACGATACCATCCTTATGGAAGG
TAGAAAGTTCCATAAAAGCTTTCAATCTTGTTTTACTTGTTTGTTTCTGTCATGTATTGGTTATCAAAGAATGATAGCTAGAGAGTAATACTGT
ATGGTGAGAGAAGAGGCTTATAGGGTTTGATTCCCAGAGATTAGTTTTAATACATTCATAGATAATTGCC |
Primers for UN45539 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGATGATGAAGGAGGGGAAG |
60.003 |
20 |
GTCCCGAACCTCCATATCCT |
60.154 |
20 |
220 |
325 |
544 |
2 |
AGTGGTCCTGGTGAGAATGG |
59.962 |
20 |
GTCCCGAACCTCCATATCCT |
60.154 |
20 |
141 |
404 |
544 |
3 |
GAGGAAGGCAATGGAAACAA |
60.051 |
20 |
GTCCCGAACCTCCATATCCT |
60.154 |
20 |
258 |
287 |
544 |
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