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Simple sequence repeat (SSR)
>UN45550
GGAATGTGAAAAATCTCGTAATCCCATCTTCAAACGGGGGCTTAAGAAGTCATCCATTAGCCAATGGTTTTATAAGATGATGCTGCTGCTTCTA
AGTGTGTTGTGTATTTTGCAACGTGAAAGGGAGTAATGCCACGTGATTGATTCTTTGTTTCTAAGTTGTGTAGTAGCGTTTATAGACTATGAGA
AGGGGTAGAGGGAAAGGGAGGAAGCAGAGTAGTGCATCTGCTCGGGGGGAAGACCGTCGAAGCGGTGAAGAAGAAAAGATCCCTGCTTACAGGA
GAAGAGGAAGGCCACAGAAGCCGTTGAAAGATGATCTCGAAGAGGAGGAGGAGGAGGAGTAAGAAGAAGAAGAAGAAGATATTGATTATACAAA
CGAGAGTGCGATCACAAGCAACGAGAGGAAGAGGAAGATATCATCTAGTGGAAGCAATACGGATATCAAAGAAGAAGAGAATGGGTTAGGTTTG
AAATCTAGCATGGATGATTCCAAGAAGTCGACATCTACGGGGTTTAGACAGAATGGAAGCAGGAGGAAAAGCAAGCCGAGACGAGCTGCTGAAG
CTGTTGTGGAATGTAATGGAGTTTGAAGAACTTCAAGAAACAGCTTTGTCAAAAGAAAAAGAATTTCAAGAAACAGGGTTGATGAATGACAACA
AGTTAAACCTGAGGAGGCTTCTTCTTTTTGGCTTTTATTACCTTCTTTTTTTTTACTTTTGCAATTTGACAACTTTTGGATATCTTTTTTGGTG
TTTATATGATTCATGAATCAATGACATCAATCTGG |
Primers for UN45550 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAAAGGGAGGAAGCAGAGT |
59.817 |
20 |
CCTCTTCCTCTCGTTGCTTG |
60.126 |
20 |
212 |
199 |
410 |
| 2 |
TAGAGGGAAAGGGAGGAAGC |
59.783 |
20 |
TTGCTTGTGATCGCACTCTC |
60.144 |
20 |
204 |
194 |
397 |
| 3 |
GAGAAGAGGAAGGCCACAGA |
59.53 |
20 |
TCCATTCTGTCTAAACCCCG |
59.926 |
20 |
247 |
281 |
527 |
|
|
