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Simple sequence repeat (SSR)
>UN45588
GGGGCGACCATTGGTCTCTGTGAACTAGTGGCAAATATCTGAAAGGACGAACATAAAAAAAATCTCAATTCGATCTAAATAGATAAAACTTATC
AGATTTCAAGAAGAAGAAGAAGAAAAAACTTTCGGTATTGATCTTGAAAGACTCAAATGAATCCTCAAGCTGTTTCGTGTAGCTTCGGCTTCGT
TTCTGCTCCACTTGTCTCTCCCAGAACTTCCCGATTTGTTATCCATGCCAAATCGGAACCATCGGAGAAATCAGTGGAGATAATGAGGAAGTTC
TCGGAGCAGTACGCTCGTCGCTCTGGCACTTACTTCTGTGTCGACAAAGGTGTTACTTCTGTCGTCATCAAGGGTTTGGCTGAGCATAAAGATT
CGTATGGTGCACCGCTTTGTCCTTGCAGACATTATGATGATAAAGCTGCCGAGGTTGGACAGGGCTTTTGGAACTGTCCTTGTGTTCCCATGAG
AGAGAGGAAGGAGTGCCATTGTATGCTTTTCTTAACTCCTGACAATGATTTCGCTGGGAAAGATCAGACTATTACCTCAGAGGAAATCAAAGAA
ACAACAGCTCACATGTGAGAAGAACTGATTCAGAGAGAAATGTATCATCAATGCATCCCTGTAAATTGATACCTCCATCGTCTTCTTCTTCTTT
TTCTCCTTCGTTCTTCTGTACAACTATTTCCCTTGTCAGATAGTATGATCTTGTTTTCTTTTGCAAATGATTACAATACAATGATATAATAAAA
GGATCCGACTTT |
Primers for UN45588 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGCAAATATCTGAAAGGACG |
60.081 |
21 |
GGGAGAGACAAGTGGAGCAG |
59.986 |
20 |
182 |
29 |
210 |
2 |
TGGCAAATATCTGAAAGGACG |
60.081 |
21 |
CTGGGAGAGACAAGTGGAGC |
59.986 |
20 |
184 |
29 |
212 |
3 |
TGGCAAATATCTGAAAGGACG |
60.081 |
21 |
TGCTCCGAGAACTTCCTCAT |
59.95 |
20 |
262 |
29 |
290 |
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