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Simple sequence repeat (SSR)
>UN45701
GGACGAGCTCTTCGTCTCCTCTGCTGCGATCTACCTGCTCTCTCTCTCTCTCTCTCTCTCACATCGCAAAGTGTGAAGCTTTTGGCGGGAAAAT
GTCGGGTAAAGGAGCAAAGGGTCTGATTATGGGGAAACCCAGCGGTAACGAGAAAGACAAGGACAAGAAGAAACGACCCATCACCCGTTCTGCT
CGAGCTGGTCTTCAATTCCCTGTAGGAAGGGTGCATCGGCTGTTGAAGACTAGATCCACTGCTCACGGAAGAGTCGGAGCAACTGCAGCTGTTT
ACACAGCGGCGATACTTGAGTATCTGACCGCAGAAGTCTTGGAGTTGGCTGGTAACGCGAGCAAGGACCTCAAGGTGAAACGTATCTCCCCCAG
GCACTTGCAGCTTGCGATTCGTGGAGATGAAGAGCTTGATACTCTCATCAAAGGAACTATAGCTGGTGGTGGTGTCATCCCTCACATCCACAAG
TCTCTCATCAACAAATCCGCCAAGGAATAGACTTTTTTTAAGAAGACTGGTAGAGTGCTCTTTGTTTAGGATCTGTTTGTTATTGTTCTACCAT
CGGTTTACTTGGTCTATCTTTATGCATATGTATTTGATGCTTATCTAAACCCTTTTGTGACTACTACCCTTTGGTTTATTCCTATCAATGTAAC
ATATAATTGCCGGAGAGTTTTTAAGCAAATTAATACATATAAAAGAATGCC |
Primers for UN45701 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCCTCTGCTGCGATCTACC |
60.119 |
20 |
GACCCTTTGCTCCTTTACCC |
59.94 |
20 |
102 |
16 |
117 |
2 |
CTCCTCTGCTGCGATCTACC |
60.119 |
20 |
TGGGTCGTTTCTTCTTGTCC |
60.088 |
20 |
159 |
16 |
174 |
3 |
CTCCTCTGCTGCGATCTACC |
60.119 |
20 |
GTCTTTCTCGTTACCGCTGG |
59.875 |
20 |
137 |
16 |
152 |
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