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Simple sequence repeat (SSR)
>UN45728
GCCAGACGTTTTGTGTGGCTAAGGAGAGGGTTGATAAGAAGATGCTTCAGGCGGCTCTTGATTGGGCTTGCGGTCCAGGGAAGGTTGATTGCTC
GGAGTTGATGCAGGGTGAGGCGTGTTATGAGCCTGATGATGTGGTTGCGCATTCTAGTTATGCGTTTAATGCTTATTACCAGAAGATGGGGAAA
GCTTCAGGGAGCTGTGACTTCAAAGGAGTTGCTACTGTTACTTCCACTGATCCAAGTAGAGGAACGTGTGTGTTCCCTGGAAGTGCTAAAAGCA
ATCAGACACTTGGACACAACACAACCGCATTGGCTCCTTCAGCGAACTCCACAACTTCTGGCTGCATCCCACAGTACTATCACCCGGAAGCTTC
CTTTGTTAGATTAACATTCCTGTCCCTTCTACTCCTCATTGCCTTAGTATTCTTGTAGAAACTCAGAGAAGAAGAAGAAGAAGAACAAGTCCTA
GTTCTTGTTTCTTAATTTTAGCTTTCTTTCCTTGAAACAGTTGAGTGGTTCTGTTCTCTCCTTGTTTTAGTTGTCTACCCGGTTTTGTCCATCA
TCTCCTTTAAGAGGAGTTCATTTAAAGGGTAGCGTGTAGGTTCCGCCTTCAGGAGATCATCAATGACTGTAACTAATCTATGTG |
Primers for UN45728 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTCCACAACTTCTGGCTGC |
60.453 |
20 |
ATGATGGACAAAACCGGGTA |
60.051 |
20 |
238 |
328 |
565 |
2 |
ACTTGGACACAACACAACCG |
59.487 |
20 |
ATGATGGACAAAACCGGGTA |
60.051 |
20 |
276 |
290 |
565 |
3 |
ACTCCACAACTTCTGGCTGC |
60.453 |
20 |
GGACAAAACCGGGTAGACAA |
59.83 |
20 |
233 |
328 |
560 |
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