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Simple sequence repeat (SSR)
>UN45824
AAGCAAACTTGCGAAGCATTGAGAGCAGTACACTTATATAGAAATAAGAACAAAAGGTCTTCGACAAATCCTACGTTTACCCCTTAAAAACCAA
ACCCCAACAACTGCAGTAAACTCTCTCACAAGTCACAAGCAAATCCATACCCCCCAAACTAAAAGCCCATCATTTCATCACACAATATTGGAGG
AGATTCAAAGTGAGAGAGAGAGAGAACACATGATGATGATAAATGAAAGTTATGTTGTTACGGCTTGAGATGGCAGTTTCGGGTGATTATGCTC
TGCTTCATAAGTAACAATAAGCATCGCTGGATCCTCCACACATCTCTCTACATGCTTCCTCGCTGGACAACCTCTCATGCTACTGCACTTGTAA
TATCCCCTGCCAATTTTCCAACACAAAACAAAAAGATTCATACTTAATCATAGCTTCTTTTTCTAGCCTGTATGAGTTGGAGTATTACCTGGGA
TAAGGAGAGCCCTTGATGGGTTTTTGACCATATTTTCGCCACGAATAATCATCAGGAGGTATGTCTGCAACCTTGTTACTTATAGCAGGCACTC
TGATCGATCTCCTAACCCTATGTTTCCTGTCCATTTTCCAACAAGGCTTTTTTTTTAGTAAGAGAAGCTCTTAAATAACTTACAAAAA |
Primers for UN45824 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCAAACTAAAAGCCCATCA |
59.931 |
20 |
TTTGTGTTGGAAAATTGGCA |
59.946 |
20 |
257 |
147 |
403 |
2 |
CACAAGCAAATCCATACCCC |
60.192 |
20 |
TTTGTGTTGGAAAATTGGCA |
59.946 |
20 |
276 |
128 |
403 |
3 |
CCCAAACTAAAAGCCCATCA |
59.931 |
20 |
AAGCAGAGCATAATCACCCG |
60.235 |
20 |
141 |
147 |
287 |
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