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Simple sequence repeat (SSR)
>UN45840
TTTTTTTTTCCTAAGAGAAAGAGAGAGAGAGAGAGAGAAGCAGAGAAGAGAGAGAGAAGCAGGAGAACAATCGGCTCTGTTTGTAAGGATTTGT
GTGTGCTTGTCTCATTTTTTTTTCCTTGATTCAACTTCATCAGAAGATCATCTTTTTATTACCCAGTGAAAGAAGATGGGTTATATGTGTGACT
TCTGTGGTGAACAAAGATCAATGGTGTACTGTCGCTCAGACGCAGCGTGTCTCTGCCTCTCCTGCGACCGGAGTGTTCATTCCGCTAACGCATT
GTCCAAGCGACATTCTAGAACACTCGTCTGCGAGAGATGCAATGCTCAGCCTGCTACAGTCAGGTGTGTTGAAGAAAGAGTTTCCCTCTGTCAA
AACTGTGACTGGTCTGGCCACAACAACAACAACAACAACAACAACAACAATTCTTCTTCCTCGTCAAATAATCACAAGAGGCAAACCATAAGCT
GCTACTCTGGTTGCCCTTCCAGCTCGGAGCTCGCTTCTATCTGGTCTTTCTGTTTGGAGTTAGCTGGACAATCCGGTTGTGAACAAGAAATGGG
GTTGATGAATATAGACGATGATGGTCAGACCAACCAAAACTGTAATGATGAGGATAAGAAAGATGGCGTTGCTGGTGGCTCCTCTTTAAGGCCT
GAAACCAGCTCTGCAGCACCTGCAACTTCATCATTTCCTAAGGAGGTTAGAGTATGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAA
TGGACTTGGCTCCTGAGAACTATGAAGAGCTCTCTGGGACAGCCTTTAACACCTCTGGAGAGCTCTTTGGACAAGGTGGAATCGATTGTCTTTT
CCAGAAGCATCAAGCAGCAGCAGCAGCAGCTCCTGAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGCAATGATGATTCTTTCATGAGTTCGAAA
ACCGAGCCGATCATTTGCTTCACATCGAAGCCAGCACATTCCAACAACATATCTTTCTCTGGACTCACAGGAGATAGCAGTGCTGGAGATTTTC
AAGAATGTGGTGCATCATCTTCAATGCAGATCTCAGCGAGCCACCATGGTATCCTCAACATCACAGATAACAATGCTTGCTCACAGTCAGTACA
CGTAATACGCGGTTATGCGTACAAGAGAAAAGAGCCCGCA |
Primers for UN45840 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGTGTTCATTCCGCTAACGC |
60.278 |
20 |
TGGAAGGGCAACCAGAGTAG |
60.246 |
20 |
232 |
260 |
491 |
2 |
AGTGTTCATTCCGCTAACGC |
60.278 |
20 |
CTGGAAGGGCAACCAGAGTA |
60.246 |
20 |
233 |
260 |
492 |
3 |
GTGTACTGTCGCTCAGACGC |
59.654 |
20 |
TGGAAGGGCAACCAGAGTAG |
60.246 |
20 |
280 |
212 |
491 |
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