Simple sequence repeat (SSR)
>UN45856
GAAAAGAATTATCTCTGTTATTATACTTTCTCTCTGCCCAAACTTCTGGTAAATAACTAAAATCAAAACACTAACAAATAATTTAGAGAAAAAA
AGAGAGGTAACTTACAGTGAGAGTTAATGATCTGAAGAAAGTAGCAACAGAGTTACATTGAGTAAAGTCTGATTCAGTTATAGACACTAATCTT
CTTCTTCTTCTCCTTCCTCCACCTTCTCTGATCATGACTTCTTCTTCTTCGATCATCTTGGATGGTTTTGGAATTGCTGTATACCCATGTCTGT
ACACCTGGAGACAGATTTCACAAGTGGTGTTTCCCTTTTCATTACACCAACGTTGTATGCAATCTCTGTGTGCGAACTTAACGGTTCCAGAGCA
AGCACAAGGAACTTCGAAGAAACTTTCTGCTTCTTCTTCATGGCAGATTCTGCAACGCGATATTCTCTGTTTCGAACTCTTCGTCTCATCAATG
TTTATAACCACTTCTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGATCCTTCTCTGTTTTTTTTGAAATTTCTTTTTTTC |
Primers for UN45856 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCTGCCCAAACTTCTGGT |
59.844 |
20 |
CAGCAATTCCAAAACCATCC |
60.309 |
20 |
237 |
31 |
267 |
| 2 |
TCTCTGCCCAAACTTCTGGT |
59.844 |
20 |
AGCAATTCCAAAACCATCCA |
60.309 |
20 |
236 |
31 |
266 |
| 3 |
TCTCTGCCCAAACTTCTGGT |
59.844 |
20 |
GCAATTCCAAAACCATCCAA |
60.681 |
20 |
235 |
31 |
265 |
|
|
