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Simple sequence repeat (SSR)
>UN45879
GCCTGAACAAACATTTTTTATTACATTAGATTTAAGACATTGGGATACAAACGAAACTGTTTTCTCCTCAAATTAACATGAAAATAGTCTCTAA
ACAAGATTTACATTAGATCGAGCTTTCTTTCTATACATACATCTTATACTCATCACTAAGAAGCTCCTCACCGGATGCGAAAACAGTATCCCAA
TCAATATTCATCGCCTCTTCTTCCAGGCTTCCAACTACTGCTTCAGGTAATGATACAAAGTTGTTGCAGGTTTTCTCAGACACATTGTGATCCT
CTTCTTCTTGGTCAGTATTGCCAAAGACAGGTGGCTCTGGTACATGATCACAATCTTCCAGTAGTTGATTAAGAACCATCTCGCTCCATTCATC
CAATTCAGGTAATGATACAAAGTTGTTGTTGTTGCAGGTTTTCTCAGATACATTGTGATCCTCTTCAGTGTTGCTAACAACATCATGTAGTGGT
GGTACATCATCACAATCACAATCACAATCTTGGAGGAGTTTAAAAAGATCCATCTCGCTCCATTCATCCGACTCAGGTGAAATCTCAACCATGT
TCTCATCGACCGTTGTTGTTGTTGTTGTTAGGGTTCGATCCTCCAATCGCTTGAGATGGCTCTGTAGTACTTTCATAGACTCCATCGCTTCCAT
AAGCTCTTCCGAATCATTCGAGTTGACGAGCTTGTCATCGTCCCACCAAAACCCTAACCCTAGGTCCTTGCGAGCCATACATATACCTAGGTCT
TCTCGCGTCGCTTTGGTATTATCACACCC |
Primers for UN45879 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAAGATCCATCTCGCTCCA |
59.773 |
20 |
GCAAGGACCTAGGGTTAGGG |
59.955 |
20 |
217 |
513 |
729 |
2 |
ACCATCTCGCTCCATTCATC |
60.042 |
20 |
TACAGAGCCATCTCAAGCGA |
59.697 |
20 |
274 |
357 |
630 |
3 |
AAAAGATCCATCTCGCTCCA |
59.773 |
20 |
GTATGGCTCGCAAGGACCTA |
60.235 |
20 |
226 |
513 |
738 |
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