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Simple sequence repeat (SSR)
>UN45908
TTTTTTATCAAAGGAAACTTATCATTTAGCGAACATGCGAATTAACATTTCGTTTTAGGCAAACAAGACATAAACGATCTGTTACAGCAAAAAA
GTGAACAAGAACCAAACCAGACAACCAAACCAAACCAGACGGAACCAAATCTAAAGCGAAAACAGACAAGCAGACAACAACCCGACCCCTTAAT
GGTTGATTACCAGCCACCGCCACCTCCGCCGCTTCCTCCATAACCACCATCACCACCTCCGTAACCACCTCCATCACGTCTGCCACCACCACCA
CCGTAGCCGCCGCCACTACCACCGTATCCGCGGCCACCACCACCACCAGATCCGTAACCTCCGCTACGTCTGTCACCATATCCACCGCCTCCTC
CACCGTATCCACCTCCACCGCGACCTCCGTATCCGCCACCACCACGGCCTCCACCACCGCCGCTTCCTCTGGACTGAGCCTCGTTGACGGTGAT
GGTACGGCCGTCGAGCTCCTTTCCGTTCATCTCCTCGATAGCATCCCTCATGGATTTCTCATCCTTGGAGGTAACGAATCCGAATCCCCTTGAT
CTTGGTCTCACGATCGTTAATGATCTTAGAATCGATAACTTCGCCGAACTGTGAGAAGGTCCTTTCTAGCTCCTGATCTCCGGTGGCCCATGCT
AGGCCTCCGACGAAACACCGGTACTCAACTTCTGCAGACATTTTTTTCTTTTTTTTTGGAGAAATCAAAGGATGATGTGAGAAAGAGACTCGTC
C |
Primers for UN45908 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTCCATAACCACCATCACC |
60.05 |
20 |
TATGGTGACAGACGTAGCGG |
59.74 |
20 |
140 |
223 |
362 |
2 |
CCTCCATAACCACCATCACC |
60.05 |
20 |
GTGACAGACGTAGCGGAGGT |
60.329 |
20 |
136 |
223 |
358 |
3 |
CAAACCAGACGGAACCAAAT |
59.83 |
20 |
TATGGTGACAGACGTAGCGG |
59.74 |
20 |
238 |
125 |
362 |
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