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Simple sequence repeat (SSR)
>UN45933
CCAGTAATAACTTATAAATTAATAATAAGGAAGTTGATATTTTATTAATTTACAGAATCACTAGTCAAAAGGAACTATATTTAAAACGAGGCTA
GTACACAAACTTTTCAATCGTTTCATCCCAAATATATAATTATGTTGCATGAAAATTACGAACTATTTAAGGCAAGTTTACAACTTTAAATGTT
CCCAGTGACTAGATACAAAAAGCTTGACTAGATCATGGTTTGCTTTCTCAAATTCCAGAGCACCATTTCAACAATATATATATATATATATATC
CCCTCATTTGTTCTTGGGCGCTCTGTACAAACAAAGGCTCAGCCACAGCACGAGCCACATGCCGGTAGGGAATTGTGGTCAGCTCCACGGATAT
CATTCAAGCCACGCACATTGTCGAGGCCCCCACGAGGAGGTCCACCACCACCTCCTTCGACGTATGCCATATTGCCGTAATCTTCTGGATTATT
TTTCTTCCTCGACCGAATAAGGGCAATTATTTTGAGAACATCATCTACACTTTTTTTTTTTTTTTTTTTTTTTTACAGTAATAACTTATAAATT
AATAATAAGGAAGTTGATATTTTATTAATTTACAGAATCACTAGTCAAAAGGAACTATATTTAAAACGAGGCTAGTACACAAACTTTTCAATCG
TTTCATATTCAGGAGTATAATAATTCAATTTATACTCTTTAACACCAGCTTTGAATCCAACACTTGCTTTAGTCTCTGTTTGTGGTGACATAAG
TCCCTCCCTACAAGTCATGAATTTAGAATTCTTGCAATAAAACAAAACAACAAGGTCTACTCGACTTAAATTAGGAATAGATTTAATTAACCTT
TTTCACAGGAATCTTTCACAAAATTATCAACTAATCAGAATGATTCTTTCTTAGACCATGATATTTGATTCGCCAAATACC |
Primers for UN45933 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCAAATTCCAGAGCACCA |
59.369 |
20 |
ATATCCGTGGAGCTGACCAC |
59.957 |
20 |
143 |
234 |
376 |
| 2 |
TCTCAAATTCCAGAGCACCA |
59.369 |
20 |
TAATTGCCCTTATTCGGTCG |
59.922 |
20 |
266 |
234 |
499 |
| 3 |
TCTCAAATTCCAGAGCACCA |
59.369 |
20 |
GGCTTGAATGATATCCGTGG |
60.296 |
20 |
153 |
234 |
386 |
|
|
