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Simple sequence repeat (SSR)
>UN46031
TTTTTTGTGGTCAAAAGTCAAGTTACATCTCTCTCTCTCTCTCTTATCTCTTCTCGAGTTCTTGTCGATGTTCTTATACAGAAGCCAAAAAACG
TGAATCAAGTTACAAACCTAATGGTTCTCTGTCTTAACTTTCAACCTGGTGTAGGAACCGACAGAATCAAAGATCAGTCATCTGCATGAGTAGA
TCGGAGTTCAATAATCGTCTTTAAGCACTCCAAAAGTCAGATCGGGGGATATTGAAAGACGGTTTGAACATCGACGAAGATATAACAATGGTCG
GTGAATCCGGAATTGATGAACTCTAGTAGAGGAAGAGGAGCTTCAGTTAAGAAGCCATCTGCTGGTGAACTTCGTCTTCAGAAAGATATATCAG
AGTTGAATCTTCGAAGCTCTTGCACGATATCATTTCCCAATGGCAAAGATGATTTGATGAACTGCAGAGATTCCATTAAACCCGATGATGGTTA
CTACCAGGTGTTGTTGCGGGGCTTTTGGTTGAAAACTCTCTGAAGTTCTTACTGAATTTTGGTGAAGTTTCTACATACCAGGTGGTCAACTCAG
TGAAGGAGTACATGCTTGTGAAACCTGCAAGGGACGCTGCTGCTAAGATGGAAGCCGAAGCAGCTACAGCTATAGATGATGGTCGACTCCATGA
TGATAATGAGTCAAACATAAGGTAACAACTCAGTGAATTAGTTCAAAATAGTTTTCGTATCCTTTAAAATTGCAAACCGGATCAAACAAATAAT
GGTTTGATCTTTGGCAGTCTCACAAAATGGTTCAAGTAGCTCTGCATAGGTTCCCCACAGACAGCATGGAAGAGAATTTCCTCTAATGAAAAAA
ATGCATGTTATAAACTAATCCAAGCCTCTATA |
Primers for UN46031 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTTTGTGGTCAAAAGTCAAGTT |
57.893 |
23 |
ACCGTCTTTCAATATCCCCC |
60.017 |
20 |
250 |
2 |
251 |
2 |
TTTTTGTGGTCAAAAGTCAAGTT |
57.893 |
23 |
TTCAATATCCCCCGATCTGA |
60.23 |
20 |
243 |
2 |
244 |
3 |
TTTTTGTGGTCAAAAGTCAAGTT |
57.893 |
23 |
TCAATATCCCCCGATCTGAC |
59.709 |
20 |
242 |
2 |
243 |
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