Simple sequence repeat (SSR)
>UN46052
GGGTCTTCTTAAAAGCCCTAGAGTTCAGTTCCTCCGACTCAGCCCCGAGCGAAAGAGAGAGAGAGAAGAAATGATGAAGCGTCTGATCCCAACG
TTCAACCGCATCCTGGTGCAGAGAGTCATCCAGCCTGCCAAAACCGAAAGCGGCATCCTCCTCCCTGAGAAGGCCTCCAAGCTGAACTCGGGAA
AGGTGATAGCAGTGGGACCTGGATCAAGGGATAAGGACGGGAAATTGATCCCAGTCTCTGTTAAGGAAGGCGACACTGTTCTTCTCCCAGAGTA
TGGCGGTACTCGGGTCAAGCTAGGCGAGAAGGAGTACCATCTCTTCCGGGATGAGGACGTCTTGGGGACGTTGCACGAAGATTGAGAAAGGCTA
AGCGGTGGTCTTGTTGGCGTTTTAATGTTATGGGAAGAGAAACAAACAAGTTATTTATAATTTTTAGTTTATGTGGTTGGACATGTCATTGAAA
TTTCCTTTAATGGACTATATTTGTCCCTTCTGAGTCGGTCGTTCCAGTTTTTCCAAATTGTCATCAATCCTAAGATAAGTTAAGTG |
Primers for UN46052 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCAGTTCCTCCGACTCAGC |
60.533 |
20 |
CTGGATGACTCTCTGCACCA |
59.98 |
20 |
104 |
24 |
127 |
2 |
TTCAGTTCCTCCGACTCAGC |
60.533 |
20 |
TGGATGACTCTCTGCACCAG |
59.98 |
20 |
103 |
24 |
126 |
3 |
TTCAGTTCCTCCGACTCAGC |
60.533 |
20 |
GAAGAACAGTGTCGCCTTCC |
59.851 |
20 |
249 |
24 |
272 |
|
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