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Simple sequence repeat (SSR)
>UN46094
TCATTTAAAAATGTATATGGTTCATGAAGATTTGTTACAAGCACAGAACAAAAGTGTATATGTAGTTGTTATACCACAGCGACTTTTGAGTTTT
TTTACAGTCTATTTACAACAAAAGTGTATACAAGAGGGAGAGAGAGAGAGAGAGAGCTAGAAGAGAAGGAGGCAGAGGAAGATGCAAAAGAAGA
AGAAAATGGATACCCGATTAAGAGACTTCTCATGATGCATCATCCTCTGGTTTTGTTGGTAAGGCTGAGCTATCGCGTTCGTGAAAGTTCCGAA
TATCCTGGTGTAGACCATGTCCCCAAAAATCCCGATCACCGGGTACAGCAAGCTCATCATCACCGCGTTGGCAAGGTCTGTCGATTCAGTTGTG
GTGGTGAAGCCACGGGAGGAGTATCGGTGGTGGTTGTGAAACGTTGGAAACATTGTTCGGTGTTGTCGCAAAGGTAAATCTGGAGTGGTGGGAG
TGTTTGATGGAAAAGGTCTCCGAGGTATTGAGTCTTGTTGTTCCTTGGAGTCAAAGGATGGAGAAGAGATGCCTCTTCCGTAGAGAGGAACCAA
TGAGGTGATGGCAATGTTGGATTTGCAGACAGGGAAGTTGTTGTTGTTGTTGTTGTTGTTCTGGTGGTGATCGATGGAGAGAGAAGAAGAGAGC
TGAACATGGAGCCACTTGTAGATGCAAGGCCAGCAGAAAAGGTGTCCGCAGAGAGTGACCACCGGATCAAGAGCTATGTCTAGACAGATGTTGC
AATCAAAGCATCCGCTGCTTTCGTTGGATTGAGATCCTGTTGGAACCGTGACGAGATTAGGTTTTTGTTTGACCGTGGAGCCATCATCAGAGCT
GAAGAAGTTTCCTTCCATGGGAGGCAAAAGTCGCTAAATCTACAAACCAAAATAACTTAATTTCTTTGATTTGTGACTTCTAATCAAAATCTCT
AGAGATCGATCTCTTTTTGCTTAAACTATGCAACGGGAAAACATTATAGATCAGAATAATCAAAATAGATAAACAGGGATTCAGATTTCAATTC
TCTAAATGAGAATCCAATCCACAGCAAAAAAACATATGATGATGATGAAGAGAGAACCTACCGAATCGATCGCCCCGAGGGAGAGGAGTTTCAG
GGAATTGGATGATGTTAATTCGCTCTATTAAGTCCC |
Primers for UN46094 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCACAGCGACTTTTGAGTTTT |
59.411 |
21 |
TTTTGCATCTTCCTCTGCCT |
59.955 |
20 |
110 |
74 |
183 |
2 |
CCACAGCGACTTTTGAGTTTT |
59.411 |
21 |
CTTTTGCATCTTCCTCTGCC |
59.955 |
20 |
111 |
74 |
184 |
3 |
CCACAGCGACTTTTGAGTTTT |
59.411 |
21 |
AACGCGATAGCTCAGCCTTA |
60.138 |
20 |
194 |
74 |
267 |
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