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Simple sequence repeat (SSR)
>UN46121
AAAAAAGACAGGAAGTAGAGAAGTCTATCTTCTCTCCGTCGTTCCCAACACCAATCGCATAATCAATCAATTGAACTTCAACACAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGCGAAACCCTAATTTCTCTGATCGTAAAAAAAAAGAAACTAACTTTACTTCAATTCCCTTTTTCTCGATTAGCTC
ACGATGGCGTTCCGAAACTGTCGGTGGGAGCTCCTCGCGGCTTCTCTAGCCCTGACTTTAGCTCTGATTCACCACCCGGTGGATGCGAACTCGG
AAGGAGATGCCCTTTACGCTCTTCGCAGGAGCTTATCGGATCCAGACCATGTGCTCCAGAGCTGGGATCCAACTCTTGTTAACCCTTGTACCTG
GTTCCATGTCACCTGTAACCAAGACAGCCGCGTCACTCGTGTGTAAGATCCCCTCTCTCTCTTGGCTCCTGTTCTGAAGAATCTATGGAGATTC
TGTTGATACAAAGTCTCTCTTTTTTTAGGATATAATTTATGAGTTAGTTTCTAATTTTAGATTTGTCCAGACAGACTTATGTCTGAGCTCTAAT
TCATACATACACCTTAAGTCGAAGCTGTTTTTTTTTTCTTATGTAAGATAGAGAGTGATATGTTGTTACTTGTTAGAGATTGTGAAATTGAGAA
GAGCAAACAATCATTAGTTCGTGACATTCTGTAAAACAAGTATGCTTTGAT |
Primers for UN46121 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCAACACCAATCGCATAAT |
60.585 |
20 |
AACGCCATCGTGAGCTAATC |
60.243 |
20 |
156 |
44 |
199 |
2 |
CCCAACACCAATCGCATAAT |
60.585 |
20 |
GAACGCCATCGTGAGCTAAT |
60.243 |
20 |
157 |
44 |
200 |
3 |
ATCTTCTCTCCGTCGTTCCC |
60.596 |
20 |
AACGCCATCGTGAGCTAATC |
60.243 |
20 |
173 |
27 |
199 |
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