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Simple sequence repeat (SSR)
>UN46160
GGAAAACCCAAAGTCATTCCTCCTTCTCTAACAAAAAAGTATCCTCCCTTTCAGTCTCTCTCTCTCCCGTCTCCTCTTTTCAAAGAACATCGAT
TTCCTAGTTTAGGGTTCTGCAGAAGAGAAAAAAAAATGATAAAGAGACGATTCTACAAGCTAGAGCATGGTGACAAAGACAGTGGATCCGACTC
CTCTTGCTTCTCTTCTGATTCTGATCCCGAGTCTGAAGAAGAAGAGTCAGAGCAATCCGAATCCGAAGACGCCGTTTCACAAGGTTCCGAAGAC
GACGACGATGACTCCGTCTCAGAGGGTGAAGAACAAGATGACTCTCCCCTAGCTGCTGATGTTGAAGATGATGATGACGATGATGATGACTCTG
ATGGTGGTGCCTATCGAGGGAGATATGAGAAGACATCGATGCAATACGGCTTAGAAGAACCACCGGAAGAGGAGGAAGAGAACTATATTCTTGG
TTGTATGATTAAATGCAAATCTGTTTACAAGTGCAGATATTGCCCAAACACCGTTTGTTTGAATGAGACAACTATGCAACAACATGTTTCATCC
AAGAAGCATGCTCGCTCTGAGAAACTAATGAAGGAAGAGAAGCTTAGAACCAATGATGATGATGATGATGATGAAGTTGAGGATCAAGAGAAGC
CATCTCAGGAGAAGCAGATAAAAGGGAACAGAAGATCACAAAGAAAGGGTAAGAGATCACAAAAACAAGGAAAGCTCGGAACCCAAGTGGATAA
CCCAGAGACTCCATCTCAGGAGAAGCAGGTAAAGGGAAACAGAAAATCACGAAGACAGGGTATGAGTTCACAGAAACAGGAAAAGGATTCGTCT
ATCACTGATGGAGGTAAAGCAGATGCGACCCCAAAATCTAGAAAGAAAATGCGTCAAACGAAGGATTGAGACTAGTGTGTATCTCTCTCCAGCA
ATATGAAAGATTCATATTGTAGTAGGAGAATTGGTTGCCTATGAGTCAGTTTTTTGTTTACCTGCAAGTTTTGTCTACGGAATATGTTTGCTTG
TAACTGATACTATGGTTTTGATTAATTGAGTTTTGAGTTATTTACT |
Primers for UN46160 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCAAAGTCATTCCTCCTTC |
58.568 |
20 |
GAGAAGCAAGAGGAGTCGGA |
59.679 |
20 |
194 |
7 |
200 |
2 |
CCCAAAGTCATTCCTCCTTC |
58.568 |
20 |
CGGATCCACTGTCTTTGTCA |
59.676 |
20 |
178 |
7 |
184 |
3 |
CCCAAAGTCATTCCTCCTTCT |
59.562 |
21 |
CGGATCCACTGTCTTTGTCA |
59.676 |
20 |
178 |
7 |
184 |
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