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Simple sequence repeat (SSR)
>UN46183
GGCTGGAGAGCATCAACAAACCACAAAGAGATAGAGAGAGAAAAAAATATTTCGAAAGAGAACCCCAAAGAAGCTAGTTATTTACAGTTTCGCC
GCTAAGTTTACATATCTGAGCATTTCAACACCGCCATGTGTGGAGGAGCTATAATCTCCGATTTCGTCCCTCCGCCGAGGTCCCGCCGCGTCAC
GAGCGAGTTCATCTGGCCGGATCTGAAAAAGAAAGGGAAAGCTTCGAAGAAGAAGCGATCCGATTTCCTCGATCTGGAGGATGAGTTCGAGGCT
GACTTTCAAGGGTTTAAGGATGATTCATTTTTCCACTGCGAATAAGAAGATGAATTCGACGTTGATGATGATGATGATGTCTTCGCCGATGTTA
AGCCCTTTGTTTTCACCGCAGGTACCAAGCCGGCACCTTCCCCTCCCACCACCACTGGTCCAGTTTCTGGCATAGAGTCTGGTGGGCAAGCTGA
GAAATGTGCTAAGAGAAAGAGGAAGAATCAGTACCGAGGGATAAGGCAGCGCCCTTGGGGCAAATGGGCCGCTGAGATCCGTGATCCTAGAAAA
GCGCTAGAGAATGGCTTGGAACATTCGACACAGCCGAGAAGCAGCAAGAGCTTATGATGCAGCTGCACGCAGATCCGTGGTAATAAAGCTAAGT
GAATTTCCCTGAGAGATGGTCCCTAGCAAACGCCCTGCTGCTAGACAGTATCTAGAGCAGTGCTAACAAACAAACCACT |
Primers for UN46183 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGAAGCGATCCGATTTCCT |
60.173 |
20 |
AGCTTGCCCACCAGACTCTA |
60.012 |
20 |
231 |
238 |
468 |
| 2 |
GCCATGTGTGGAGGAGCTAT |
60.104 |
20 |
CGGTGAAAACAAAGGGCTTA |
60.103 |
20 |
268 |
127 |
394 |
| 3 |
AAGAAGCGATCCGATTTCCT |
60.173 |
20 |
CGGTGAAAACAAAGGGCTTA |
60.103 |
20 |
157 |
238 |
394 |
|
|
