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Simple sequence repeat (SSR)
>UN46299
GGAAGGACAGGATCAAACTCACACACACAAAAGAAGCAAGAAAACTATTTTTGATATACAGAGAGAGAGAGAGAGAGATGGAGAAGATGAAGTG
TGAGCTATGCGACGGTGTGGCGTGGATGTTCTGTGAGTCAGACCAGGCGAGTTTATGCTGGGACTGCGACGGTTACGTTCACGGAGCTAACTTT
CTGGTGGCTAAACACGCGCGCTGCCTTCTTTGTAGCACGTGCCAGTCTCCTACGGCTTGGAAAGCTTCGGGTCTTCGACTATGTCCAACAGTTT
CCAACTGCGAGCCTTGCCTTGCTCGTAAGAATAGTAACGGAGAAGACGACGGCGCAGAGTCTTATGATGAGGATGAGGAGGAAGAAGAAGAAGA
AAGTGATGATGAGGTAGAGGAAGAAGAAGGGGAGAATCAGGTGGTGCCGTGGGATGCGGCTGCGGCTGTGCAAGAACCTCCAGTGATGAGTTCT
TGGCGTTCCGTTAGCAGCGGAGGAGAAGAACGTTTCAGTTTGGTAGAGAAAAGGACGCGACAAGATTTAGATCTTAACTCCTCCCATGATGAAT
CAAACGAGTCACGACCGTTGAAACGGCTAACGAGAGATGAAACCTGGCCAAGATCAACGGCTATGATGAAATCAACCTTAAAAATCAAACGACT
GTGATACACCACCAACATAAATAAAATGCCAGCCGTTGATTTCTGCTTATTCAGATTAGATTAATCATCACTGTTCATTGCAAACAGTTCATCT
TTTAGTTAATTGAGTTTAGCTACCTTTATGGCTTAGTCTGCTTACTGTTTTTTCTGAAACCAAATGTACTGGTTGAACCCATTTTGCTTAGCTG
CTTACGATTTCGTATTTTTGGTTGTATTATTCACCTATCTATAATTATGTTGA |
Primers for UN46299 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGGGTCTTCGACTATGTCC |
60.073 |
20 |
TTCTTCTCCTCCGCTGCTAA |
60.227 |
20 |
246 |
255 |
500 |
2 |
TTGTAGCACGTGCCAGTCTC |
60.056 |
20 |
TAACGGAACGCCAAGAACTC |
60.249 |
20 |
266 |
218 |
483 |
3 |
TCGGGTCTTCGACTATGTCC |
60.073 |
20 |
TAACGGAACGCCAAGAACTC |
60.249 |
20 |
229 |
255 |
483 |
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